RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ARID5AQ03989 594 aa12.84□□□□□ -0.35
PFDN1-207ENST00000524074 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
PFDN1-207ENST00000524074 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
PFDN1-207ENST00000524074 IL2RAP01589 272 aa12.83□□□□□ -0.36
PFDN1-207ENST00000524074 EIF4BP23588 611 aaKnown RBP12.83□□□□□ -0.36
PFDN1-207ENST00000524074 TEAD4Q15561 434 aa12.83□□□□□ -0.36
PFDN1-207ENST00000524074 IFT43Q96FT9 208 aa12.83□□□□□ -0.36
PFDN1-207ENST00000524074 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
PFDN1-207ENST00000524074 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
PFDN1-207ENST00000524074 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
PFDN1-207ENST00000524074 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
PFDN1-207ENST00000524074 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
PFDN1-207ENST00000524074 ORC1Q13415 861 aa12.82□□□□□ -0.36
PFDN1-207ENST00000524074 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
PFDN1-207ENST00000524074 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
PFDN1-207ENST00000524074 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
PFDN1-207ENST00000524074 HCN4Q9Y3Q4 1203 aa12.82□□□□□ -0.36
PFDN1-207ENST00000524074 CTSHP09668 335 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 NOS2P35228 1153 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 CCDC144BQ3MJ40 725 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 KLK14Q9P0G3 267 aa12.81□□□□□ -0.36
PFDN1-207ENST00000524074 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
PFDN1-207ENST00000524074 ADH1CP00326 375 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 PMFBP1Q8TBY8 1022 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 GPR152Q8TDT2 470 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 PCDHGB7Q9Y5F8 929 aa12.8□□□□□ -0.36
PFDN1-207ENST00000524074 NR5A1Q13285 461 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
PFDN1-207ENST00000524074 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 MPNDQ8N594 471 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
PFDN1-207ENST00000524074 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
PFDN1-207ENST00000524074 RPLP1P05386 114 aaKnown RBP12.78□□□□□ -0.36
PFDN1-207ENST00000524074 ANKLE1Q8NAG6 615 aa12.78□□□□□ -0.36
PFDN1-207ENST00000524074 ZDHHC1Q8WTX9 485 aa12.78□□□□□ -0.36
PFDN1-207ENST00000524074 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
PFDN1-207ENST00000524074 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
PFDN1-207ENST00000524074 PLA2G2CQ5R387 149 aa12.77□□□□□ -0.37
PFDN1-207ENST00000524074 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
PFDN1-207ENST00000524074 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
PFDN1-207ENST00000524074 RACK1P63244 317 aaKnown RBP12.76□□□□□ -0.37
PFDN1-207ENST00000524074 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
PFDN1-207ENST00000524074 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 POTEMA6NI47 508 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 OPLAHO14841 1288 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 GGCXP38435 758 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 RPIAP49247 311 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 HRH3Q9Y5N1 445 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
PFDN1-207ENST00000524074 ADH1AP07327 375 aa12.74□□□□□ -0.37
PFDN1-207ENST00000524074 PTPN12Q05209 780 aaKnown RBP12.74□□□□□ -0.37
PFDN1-207ENST00000524074 RBL2Q08999 1139 aa12.74□□□□□ -0.37
PFDN1-207ENST00000524074 CLN3Q13286 438 aa12.74□□□□□ -0.37
PFDN1-207ENST00000524074 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
PFDN1-207ENST00000524074 ZSWIM4Q9H7M6 989 aa12.74□□□□□ -0.37
PFDN1-207ENST00000524074 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
PFDN1-207ENST00000524074 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
PFDN1-207ENST00000524074 C12orf49Q9H741 205 aa12.73□□□□□ -0.37
PFDN1-207ENST00000524074 A6NHS1 94 aa12.72□□□□□ -0.37
PFDN1-207ENST00000524074 GIPC1O14908 333 aa12.72□□□□□ -0.37
PFDN1-207ENST00000524074 STK10O94804 968 aaKnown RBP12.72□□□□□ -0.37
PFDN1-207ENST00000524074 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
PFDN1-207ENST00000524074 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-207ENST00000524074 SRA1Q9HD15 236 aaKnown RBP12.72□□□□□ -0.37
PFDN1-207ENST00000524074 NR3C2P08235 984 aa12.71□□□□□ -0.37
PFDN1-207ENST00000524074 CENPCQ03188 943 aa12.71□□□□□ -0.37
PFDN1-207ENST00000524074 C1orf53Q5VUE5 145 aa12.71□□□□□ -0.37
PFDN1-207ENST00000524074 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
PFDN1-207ENST00000524074 NIFKQ9BYG3 293 aaKnown RBP12.71□□□□□ -0.37
PFDN1-207ENST00000524074 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-207ENST00000524074 PIF1Q9H611 641 aa12.7□□□□□ -0.38
PFDN1-207ENST00000524074 HIF1AQ16665 826 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 LHX8Q68G74 356 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 SDE2Q6IQ49 451 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 ZNF662Q6ZS27 426 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
PFDN1-207ENST00000524074 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 ZNF295-AS1Q8N0V1 137 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.38
PFDN1-207ENST00000524074 OSBPL2Q9H1P3 480 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 USP31Q70CQ4 1352 aa12.69□□□□□ -0.38
PFDN1-207ENST00000524074 MEN1O00255 615 aa12.68□□□□□ -0.38
PFDN1-207ENST00000524074 SIAH2O43255 324 aa12.68□□□□□ -0.38
PFDN1-207ENST00000524074 TAF1CQ15572 869 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-207ENST00000524074 ZSCAN10Q96SZ4 725 aaPredicted RBP12.68□□□□□ -0.38
PFDN1-207ENST00000524074 FGRP09769 529 aa12.67□□□□□ -0.38
PFDN1-207ENST00000524074 TMEM214Q6NUQ4 689 aaKnown RBP12.67□□□□□ -0.38
PFDN1-207ENST00000524074 CCDC74AQ96AQ1 378 aa12.67□□□□□ -0.38
PFDN1-207ENST00000524074 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
PFDN1-207ENST00000524074 MICAL2O94851 1124 aa12.66□□□□□ -0.38
PFDN1-207ENST00000524074 GJA8P48165 433 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms