RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MPSTP25325 297 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 MAPK1P28482 360 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 TXLNAP40222 546 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 KIFC2Q96AC6 838 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 FAM13BQ9NYF5 915 aa6.71□□□□□ -1.34
SKP1-212ENST00000523966 ST8SIA5O15466 376 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 MSX1P28360 303 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
SKP1-212ENST00000523966 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 GAS2L1Q99501 681 aaPredicted RBP6.7□□□□□ -1.34
SKP1-212ENST00000523966 KLK14Q9P0G3 267 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 DCTN4Q9UJW0 460 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
SKP1-212ENST00000523966 NPR3P17342 541 aa6.69□□□□□ -1.34
SKP1-212ENST00000523966 EIF1AXP47813 144 aaKnown RBP6.69□□□□□ -1.34
SKP1-212ENST00000523966 DYRK1BQ9Y463 629 aa6.69□□□□□ -1.34
SKP1-212ENST00000523966 F11P03951 625 aa6.68□□□□□ -1.34
SKP1-212ENST00000523966 SUSD3Q96L08 255 aa6.68□□□□□ -1.34
SKP1-212ENST00000523966 DNMT3LQ9UJW3 386 aa6.68□□□□□ -1.34
SKP1-212ENST00000523966 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 ZAP70P43403 619 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 USP5P45974 858 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 EFHC2Q5JST6 749 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 Q6ZNB5 142 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 TREML1Q86YW5 311 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 CITED4Q96RK1 184 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 GPAMQ9HCL2 828 aa6.67□□□□□ -1.34
SKP1-212ENST00000523966 A0A1W2PNR3 127 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 TGFBR3LH3BV60 316 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 H7C1W4 665 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 MICAL2O94851 1124 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 RPLP1P05386 114 aaKnown RBP6.66□□□□□ -1.34
SKP1-212ENST00000523966 DNM1Q05193 864 aaKnown RBP6.66□□□□□ -1.34
SKP1-212ENST00000523966 PDE3BQ13370 1112 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 LRRC69Q6ZNQ3 347 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 BCL11AQ9H165 835 aa6.66□□□□□ -1.34
SKP1-212ENST00000523966 EPB42P16452 691 aa6.65□□□□□ -1.34
SKP1-212ENST00000523966 MZF1P28698 734 aaPredicted RBP6.65□□□□□ -1.34
SKP1-212ENST00000523966 ETFBKMTQ8IXQ9 262 aa6.65□□□□□ -1.34
SKP1-212ENST00000523966 CEP63Q96MT8 703 aa6.65□□□□□ -1.34
SKP1-212ENST00000523966 RUBCNLQ9H714 662 aa6.65□□□□□ -1.34
SKP1-212ENST00000523966 DACH1Q9UI36 760 aa6.65□□□□□ -1.34
SKP1-212ENST00000523966 ANKRD33BA6NCL7 494 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 ZBTB39O15060 712 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 ATP4AP20648 1035 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 ARSDP51689 593 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 IER5Q5VY09 327 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 FIGNL1Q6PIW4 674 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 EDEM1Q92611 657 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 HSH2DQ96JZ2 352 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 ASB16Q96NS5 453 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 CRISPLD1Q9H336 500 aa6.64□□□□□ -1.35
SKP1-212ENST00000523966 FNDC3AQ9Y2H6 1198 aaKnown RBP6.64□□□□□ -1.35
SKP1-212ENST00000523966 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 NEFLP07196 543 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 IDH3AP50213 366 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 PTSQ03393 145 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
SKP1-212ENST00000523966 C8orf34Q49A92 452 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 BTLAQ7Z6A9 289 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
SKP1-212ENST00000523966 ZNF280CQ8ND82 737 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 GPR152Q8TDT2 470 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 FOXD4L4Q8WXT5 416 aaPredicted RBP6.63□□□□□ -1.35
SKP1-212ENST00000523966 TRIM47Q96LD4 638 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 RBCK1Q9BYM8 510 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 CCDC87Q9NVE4 849 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 POLIQ9UNA4 740 aa6.63□□□□□ -1.35
SKP1-212ENST00000523966 C11orf95C9JLR9 678 aaPredicted RBP6.62□□□□□ -1.35
SKP1-212ENST00000523966 FZD6O60353 706 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 EHHADHQ08426 723 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 ECM1Q16610 540 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 CMTR1Q8N1G2 835 aaKnown RBP6.62□□□□□ -1.35
SKP1-212ENST00000523966 C7orf43Q8WVR3 580 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 DMRTB1Q96MA1 342 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 NUCKS1Q9H1E3 243 aaKnown RBP6.62□□□□□ -1.35
SKP1-212ENST00000523966 GMPR2Q9P2T1 348 aaKnown RBP6.62□□□□□ -1.35
SKP1-212ENST00000523966 BCS1LQ9Y276 419 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 AMOTL2Q9Y2J4 779 aa6.62□□□□□ -1.35
SKP1-212ENST00000523966 PDGFAP04085 211 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
SKP1-212ENST00000523966 FOXR1Q6PIV2 292 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 DNAJC14Q6Y2X3 702 aaPredicted RBP6.61□□□□□ -1.35
SKP1-212ENST00000523966 RGL4Q8IZJ4 473 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 CCDC155Q8N6L0 562 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 NUDT16Q96DE0 195 aaKnown RBP6.61□□□□□ -1.35
SKP1-212ENST00000523966 GMCL1Q96IK5 515 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 BCL2L13Q9BXK5 485 aa6.61□□□□□ -1.35
SKP1-212ENST00000523966 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
SKP1-212ENST00000523966 ATXN7O15265 892 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms