RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CDV3Q9UKY7 258 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-239ENST00000523685 ADGRL3Q9HAR2 1447 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 PNPLA6Q8IY17 1366 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 RBM6P78332 1123 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 TBC1D9Q6ZT07 1266 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 NFATC2IPQ8NCF5 419 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 ORAI2Q96SN7 254 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 NRXN3Q9Y4C0 1643 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 SETBP1Q9Y6X0 1596 aa7.88□□□□□ -1.15
CTNNA1-239ENST00000523685 XRN1Q8IZH2 1706 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 PIK3CDO00329 1044 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 ATP9BO43861 1147 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 RFX1P22670 979 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 CFAP70Q5T0N1 1121 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 SPRYD7Q5W111 196 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 PHTF2Q8N3S3 785 aa7.87□□□□□ -1.15
CTNNA1-239ENST00000523685 RGS12O14924 1447 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 SKIP12755 728 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 USP21Q9UK80 565 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 C1orf167Q5SNV9 1468 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 CDK12Q9NYV4 1490 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 SPHKAPQ2M3C7 1700 aa7.86□□□□□ -1.15
CTNNA1-239ENST00000523685 CLTCL1P53675 1640 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 ROBO2Q9HCK4 1378 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 WNT7AO00755 349 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 XPCQ01831 940 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 VASH1Q7L8A9 365 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 ZNF598Q86UK7 904 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 PRKD2Q9BZL6 878 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 MAP4K5Q9Y4K4 846 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 MAFBQ9Y5Q3 323 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 NHSL1Q5SYE7 1610 aa7.85□□□□□ -1.15
CTNNA1-239ENST00000523685 ESPNB1AK53 854 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 ARID5BQ14865 1188 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 MAP7D1Q3KQU3 841 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 ZNF697Q5TEC3 545 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 MPNDQ8N594 471 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 KCTD15Q96SI1 283 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 STK26Q9P289 416 aa7.84□□□□□ -1.15
CTNNA1-239ENST00000523685 NALCNQ8IZF0 1738 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 SOS2Q07890 1332 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 ACIN1Q9UKV3 1341 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 SIAH2O43255 324 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 CCDC125Q86Z20 511 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 MRGPRX2Q96LB1 330 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 TRPC5Q9UL62 973 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
CTNNA1-239ENST00000523685 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 FOXO3O43524 673 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 NAIPQ13075 1403 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 PTCH1Q13635 1447 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 RGL3Q3MIN7 710 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 TSGA10IPQ3SY00 556 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
CTNNA1-239ENST00000523685 RPGRIP1LQ68CZ1 1315 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 FOXC1Q12948 553 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 VRTNQ9H8Y1 702 aa7.81□□□□□ -1.16
CTNNA1-239ENST00000523685 NPHP3Q7Z494 1330 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 HFM1A2PYH4 1435 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 GRM5P41594 1212 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 RAB15P59190 212 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 DEPDC4Q8N2C3 294 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 DOLKQ9UPQ8 538 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 TLL2Q9Y6L7 1015 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 KIF1BO60333 1816 aa7.8□□□□□ -1.16
CTNNA1-239ENST00000523685 ADGRF5Q8IZF2 1346 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 RRBP1Q9P2E9 1410 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 NCOA4Q13772 614 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 EML3Q32P44 896 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 CDCA8Q53HL2 280 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 INTS6LQ5JSJ4 861 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 PKD2L1Q9P0L9 805 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 PCDHB11Q9Y5F2 797 aa7.79□□□□□ -1.16
CTNNA1-239ENST00000523685 ATRNO75882 1429 aa7.78□□□□□ -1.16
CTNNA1-239ENST00000523685 ADH1CP00326 375 aa7.78□□□□□ -1.16
CTNNA1-239ENST00000523685 NR5A1Q13285 461 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms