RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 APLP1P51693 650 aa15.54■□□□□ 0.08
CTNNA1-237ENST00000523275 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
CTNNA1-237ENST00000523275 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
CTNNA1-237ENST00000523275 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
CTNNA1-237ENST00000523275 SRGNP10124 158 aa15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 EIF4A1P60842 406 aaKnown RBP15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 TPTE2Q6XPS3 522 aa15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
CTNNA1-237ENST00000523275 SBF1O95248 1867 aa15.52■□□□□ 0.08
CTNNA1-237ENST00000523275 GLTPD2A6NH11 291 aa15.52■□□□□ 0.08
CTNNA1-237ENST00000523275 MASTLQ96GX5 879 aa15.52■□□□□ 0.08
CTNNA1-237ENST00000523275 ANKRD31Q8N7Z5 1873 aa15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 FSTL1Q12841 308 aa15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 HLFQ16534 295 aa15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 PRPF40BQ6NWY9 871 aaKnown RBP15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 NGEFQ8N5V2 710 aa15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 CEP350Q5VT06 3117 aa15.51■□□□□ 0.07
CTNNA1-237ENST00000523275 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
CTNNA1-237ENST00000523275 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
CTNNA1-237ENST00000523275 KLRG2A4D1S0 409 aaPredicted RBP15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 ERVV-1B6SEH8 477 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 NPR1P16066 1061 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 RIPK4P57078 832 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 BCORQ6W2J9 1755 aa15.49■□□□□ 0.07
CTNNA1-237ENST00000523275 LTBP3Q9NS15 1303 aa15.48■□□□□ 0.07
CTNNA1-237ENST00000523275 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
CTNNA1-237ENST00000523275 DLG5Q8TDM6 1919 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 MYL6BP14649 208 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 KIF6Q6ZMV9 814 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 DNAJC5GQ8N7S2 189 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
CTNNA1-237ENST00000523275 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 TMPOP42166 694 aaKnown RBP15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 TTLL7Q6ZT98 887 aa15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 NYXQ9GZU5 481 aa15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
CTNNA1-237ENST00000523275 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
CTNNA1-237ENST00000523275 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
CTNNA1-237ENST00000523275 SLX4Q8IY92 1834 aa15.45■□□□□ 0.06
CTNNA1-237ENST00000523275 POTECB2RU33 542 aa15.44■□□□□ 0.06
CTNNA1-237ENST00000523275 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
CTNNA1-237ENST00000523275 CCDC93Q567U6 631 aa15.44■□□□□ 0.06
CTNNA1-237ENST00000523275 ZBTB3Q9H5J0 574 aa15.44■□□□□ 0.06
CTNNA1-237ENST00000523275 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
CTNNA1-237ENST00000523275 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
CTNNA1-237ENST00000523275 GPTP24298 496 aa15.43■□□□□ 0.06
CTNNA1-237ENST00000523275 NUTM1Q86Y26 1132 aa15.43■□□□□ 0.06
CTNNA1-237ENST00000523275 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
CTNNA1-237ENST00000523275 FER1L6Q2WGJ9 1857 aa15.43■□□□□ 0.06
CTNNA1-237ENST00000523275 CCDC88AQ3V6T2 1871 aa15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 NEUROD2Q15784 382 aa15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
CTNNA1-237ENST00000523275 HTRA3P83110 453 aa15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 PDIA6Q15084 440 aa15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 SUSD4Q5VX71 490 aa15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
CTNNA1-237ENST00000523275 CHL1O00533 1208 aa15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 OLFM4Q6UX06 510 aa15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 ZNF277Q9NRM2 450 aaPredicted RBP15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 UBN2Q6ZU65 1347 aa15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
CTNNA1-237ENST00000523275 ABCC12Q96J65 1359 aa15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 PARP10Q53GL7 1025 aa15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 RPGRQ92834 1020 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 ADAMTS8Q9UP79 889 aa15.39■□□□□ 0.05
CTNNA1-237ENST00000523275 NTSR2O95665 410 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 ANXA1P04083 346 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 SYNE4Q8N205 404 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 ARFGEF2Q9Y6D5 1785 aa15.38■□□□□ 0.05
CTNNA1-237ENST00000523275 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
CTNNA1-237ENST00000523275 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms