RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SSRP1Q08945 709 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 NEFHP12036 1026 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TSG101Q99816 390 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TRIM27P14373 513 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TRAF1Q13077 416 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 CETN2P41208 172 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 POLD1P28340 1107 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 DUOX2Q9NRD8 1548 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 FERMT3Q86UX7 667 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC82Q8N4S0 544 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 NYXQ9GZU5 481 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 ATP10BO94823 1461 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 ZNF397Q8NF99 534 aaPredicted RBP18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 KAT14Q9H8E8 782 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 SNRKQ9NRH2 765 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 PPIP5K1Q6PFW1 1433 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MAP3K11Q16584 847 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MFSD6Q6ZSS7 791 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MCM4P33991 863 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 XAGE3Q8WTP9 111 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ZRSR2Q15696 482 aaKnown RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 TPTE2Q6XPS3 522 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC178Q5BJE1 867 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 NIP7Q9Y221 180 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 TMEM67Q5HYA8 995 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 GOLGA6L10A6NI86 522 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 HSPA2P54652 639 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 TMEM87AQ8NBN3 555 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 SEPT7Q16181 437 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC112Q8NEF3 446 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 TAF4BQ92750 862 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 UBA5Q9GZZ9 404 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ANXA1P04083 346 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CFAP100Q494V2 611 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 FLT4P35916 1363 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 H0YHG0 523 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 ERLIN1O75477 346 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 DISP3Q9P2K9 1392 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 SSR1P43307 286 aaKnown RBP18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 SLC39A6Q13433 755 aa18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 KSR2Q6VAB6 950 aa18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 NF2P35240 595 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 IL15P40933 162 aaPredicted RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ZNF804AQ7Z570 1209 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 CETN1Q12798 172 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 SKIDA1Q1XH10 827 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 KIAA1328Q86T90 577 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 CALML4Q96GE6 196 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ZC3H12CQ9C0D7 883 aaKnown RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 AMPD3Q01432 767 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 FILIP1Q7Z7B0 1213 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms