RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 SYT17Q9BSW7 474 aa11.83□□□□□ -0.52
POLB-212ENST00000522297 FHDC1Q9C0D6 1143 aaPredicted RBP11.83□□□□□ -0.52
POLB-212ENST00000522297 PLEKHG2Q9H7P9 1386 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 LOC102724428A0A0B4J2F2 783 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
POLB-212ENST00000522297 HMOX1P09601 288 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 HMGB2P26583 209 aaKnown RBP11.82□□□□□ -0.52
POLB-212ENST00000522297 SIK1P57059 783 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 C1QTNF8P60827 252 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 DOT1LQ8TEK3 1739 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 CASZ1Q86V15 1759 aa11.82□□□□□ -0.52
POLB-212ENST00000522297 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
POLB-212ENST00000522297 CABP4P57796 275 aa11.81□□□□□ -0.52
POLB-212ENST00000522297 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
POLB-212ENST00000522297 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
POLB-212ENST00000522297 KDRP35968 1356 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 POLD1P28340 1107 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 ITPK1Q13572 414 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 LINC00116Q8NCU8 138 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 FLAD1Q8NFF5 587 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
POLB-212ENST00000522297 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 AK7Q96M32 723 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 ADAM33Q9BZ11 813 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 LGR6Q9HBX8 967 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
POLB-212ENST00000522297 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
POLB-212ENST00000522297 MTHFSDQ2M296 383 aaKnown RBP11.78□□□□□ -0.52
POLB-212ENST00000522297 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
POLB-212ENST00000522297 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
POLB-212ENST00000522297 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.52
POLB-212ENST00000522297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
POLB-212ENST00000522297 PTCD1O75127 700 aaKnown RBP11.77□□□□□ -0.53
POLB-212ENST00000522297 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
POLB-212ENST00000522297 LY75O60449 1722 aa11.77□□□□□ -0.53
POLB-212ENST00000522297 MAP3K7O43318 606 aa11.76□□□□□ -0.53
POLB-212ENST00000522297 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
POLB-212ENST00000522297 GNPATO15228 680 aa11.75□□□□□ -0.53
POLB-212ENST00000522297 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
POLB-212ENST00000522297 SSFA2P28290 1259 aa11.75□□□□□ -0.53
POLB-212ENST00000522297 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
POLB-212ENST00000522297 C6orf132Q5T0Z8 1188 aa11.75□□□□□ -0.53
POLB-212ENST00000522297 RC3H1Q5TC82 1133 aaKnown RBP11.74□□□□□ -0.53
POLB-212ENST00000522297 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
POLB-212ENST00000522297 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
POLB-212ENST00000522297 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
POLB-212ENST00000522297 POTEMA6NI47 508 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 ITGB4P16144 1822 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 PTPREP23469 700 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 PBX2P40425 430 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 TSR1Q2NL82 804 aaKnown RBP11.73□□□□□ -0.53
POLB-212ENST00000522297 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
POLB-212ENST00000522297 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
POLB-212ENST00000522297 RPS6KA4O75676 772 aa11.72□□□□□ -0.53
POLB-212ENST00000522297 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
POLB-212ENST00000522297 GPR162Q16538 588 aa11.72□□□□□ -0.53
POLB-212ENST00000522297 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
POLB-212ENST00000522297 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
POLB-212ENST00000522297 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
POLB-212ENST00000522297 ARHGAP33O14559 1287 aa11.71□□□□□ -0.53
POLB-212ENST00000522297 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
POLB-212ENST00000522297 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLB-212ENST00000522297 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
POLB-212ENST00000522297 GNAT3A8MTJ3 354 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
POLB-212ENST00000522297 GPIHBP1Q8IV16 184 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
POLB-212ENST00000522297 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 C5P01031 1676 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 CHD4Q14839 1912 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 FCHSD2O94868 740 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 RFC4P35249 363 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
POLB-212ENST00000522297 DNAJC10Q8IXB1 793 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
POLB-212ENST00000522297 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
POLB-212ENST00000522297 MMP10P09238 476 aa11.68□□□□□ -0.54
POLB-212ENST00000522297 TEFQ10587 303 aa11.68□□□□□ -0.54
POLB-212ENST00000522297 PTGDRQ13258 359 aa11.68□□□□□ -0.54
POLB-212ENST00000522297 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
POLB-212ENST00000522297 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
POLB-212ENST00000522297 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
POLB-212ENST00000522297 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
POLB-212ENST00000522297 CYP19A1P11511 503 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms