RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 CDC14CA4D256 554 aa9.31□□□□□ -0.92
SKP1-208ENST00000521216 PPFIA3O75145 1194 aa9.31□□□□□ -0.92
SKP1-208ENST00000521216 ITGA6P23229 1130 aa9.31□□□□□ -0.92
SKP1-208ENST00000521216 MYO19Q96H55 970 aa9.31□□□□□ -0.92
SKP1-208ENST00000521216 SUSD3Q96L08 255 aa9.31□□□□□ -0.92
SKP1-208ENST00000521216 H7C1W4 665 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
SKP1-208ENST00000521216 DBN1Q16643 649 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 C7orf43Q8WVR3 580 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
SKP1-208ENST00000521216 CUEDC1Q9NWM3 386 aaPredicted RBP9.3□□□□□ -0.92
SKP1-208ENST00000521216 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
SKP1-208ENST00000521216 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
SKP1-208ENST00000521216 H3BRB1 525 aa9.29□□□□□ -0.92
SKP1-208ENST00000521216 BRD2P25440 801 aaKnown RBP9.29□□□□□ -0.92
SKP1-208ENST00000521216 HIF1AQ16665 826 aa9.29□□□□□ -0.92
SKP1-208ENST00000521216 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
SKP1-208ENST00000521216 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
SKP1-208ENST00000521216 CRISPLD1Q9H336 500 aa9.29□□□□□ -0.92
SKP1-208ENST00000521216 TUT1Q9H6E5 874 aaKnown RBP9.29□□□□□ -0.92
SKP1-208ENST00000521216 STIM2Q9P246 746 aa9.29□□□□□ -0.92
SKP1-208ENST00000521216 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
SKP1-208ENST00000521216 AAMPQ13685 434 aa9.28□□□□□ -0.92
SKP1-208ENST00000521216 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
SKP1-208ENST00000521216 VWA5B2Q8N398 1253 aa9.28□□□□□ -0.92
SKP1-208ENST00000521216 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
SKP1-208ENST00000521216 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
SKP1-208ENST00000521216 GPC6Q9Y625 555 aaPredicted RBP9.28□□□□□ -0.92
SKP1-208ENST00000521216 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
SKP1-208ENST00000521216 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
SKP1-208ENST00000521216 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
SKP1-208ENST00000521216 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
SKP1-208ENST00000521216 ICMTO60725 284 aa9.26□□□□□ -0.93
SKP1-208ENST00000521216 MPSTP25325 297 aa9.26□□□□□ -0.93
SKP1-208ENST00000521216 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
SKP1-208ENST00000521216 NLRP8Q86W28 1048 aa9.26□□□□□ -0.93
SKP1-208ENST00000521216 ZCCHC2Q9C0B9 1178 aaKnown RBP9.26□□□□□ -0.93
SKP1-208ENST00000521216 EGFL7Q9UHF1 273 aa9.26□□□□□ -0.93
SKP1-208ENST00000521216 SOWAHDA6NJG2 315 aa9.25□□□□□ -0.93
SKP1-208ENST00000521216 LBRQ14739 615 aaKnown RBP9.25□□□□□ -0.93
SKP1-208ENST00000521216 FIGNL1Q6PIW4 674 aa9.25□□□□□ -0.93
SKP1-208ENST00000521216 TREML1Q86YW5 311 aa9.25□□□□□ -0.93
SKP1-208ENST00000521216 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
SKP1-208ENST00000521216 ABTB2Q8N961 1025 aa9.25□□□□□ -0.93
SKP1-208ENST00000521216 ZNF837Q96EG3 531 aaPredicted RBP9.25□□□□□ -0.93
SKP1-208ENST00000521216 DCDC2BA2VCK2 349 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 TGFBR3LH3BV60 316 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 ZBTB39O15060 712 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 ATXN7O15265 892 aaPredicted RBP9.24□□□□□ -0.93
SKP1-208ENST00000521216 MICAL2O94851 1124 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 FAM13AO94988 1023 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 THBS1P07996 1170 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 NOM1Q5C9Z4 860 aaKnown RBP9.24□□□□□ -0.93
SKP1-208ENST00000521216 FAM26DQ5JW98 314 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 BTLAQ7Z6A9 289 aa9.24□□□□□ -0.93
SKP1-208ENST00000521216 GPR25O00155 361 aa9.23□□□□□ -0.93
SKP1-208ENST00000521216 KHNYNO15037 678 aaKnown RBP9.23□□□□□ -0.93
SKP1-208ENST00000521216 ATCAYQ86WG3 371 aa9.23□□□□□ -0.93
SKP1-208ENST00000521216 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
SKP1-208ENST00000521216 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
SKP1-208ENST00000521216 EIF1AXP47813 144 aaKnown RBP9.22□□□□□ -0.93
SKP1-208ENST00000521216 IDH3AP50213 366 aa9.22□□□□□ -0.93
SKP1-208ENST00000521216 TRERF1Q96PN7 1200 aa9.22□□□□□ -0.93
SKP1-208ENST00000521216 ZAP70P43403 619 aa9.21□□□□□ -0.94
SKP1-208ENST00000521216 ABHD17AQ96GS6 310 aa9.21□□□□□ -0.94
SKP1-208ENST00000521216 USP20Q9Y2K6 914 aa9.21□□□□□ -0.94
SKP1-208ENST00000521216 H3BM21 787 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
SKP1-208ENST00000521216 BNIP3LO60238 219 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 IER5Q5VY09 327 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 ALKBH2Q6NS38 261 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 GPR152Q8TDT2 470 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
SKP1-208ENST00000521216 ARSDP51689 593 aa9.19□□□□□ -0.94
SKP1-208ENST00000521216 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
SKP1-208ENST00000521216 TYRO3Q06418 890 aa9.19□□□□□ -0.94
SKP1-208ENST00000521216 UBAP2LQ14157 1087 aaKnown RBP9.19□□□□□ -0.94
SKP1-208ENST00000521216 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
SKP1-208ENST00000521216 NPAS3Q8IXF0 933 aa9.19□□□□□ -0.94
SKP1-208ENST00000521216 DMGDHQ9UI17 866 aaKnown RBP9.19□□□□□ -0.94
SKP1-208ENST00000521216 PHF24Q9UPV7 400 aa9.19□□□□□ -0.94
SKP1-208ENST00000521216 OPLAHO14841 1288 aa9.18□□□□□ -0.94
SKP1-208ENST00000521216 MAPTP10636 758 aaKnown RBP9.18□□□□□ -0.94
SKP1-208ENST00000521216 NPR3P17342 541 aa9.18□□□□□ -0.94
SKP1-208ENST00000521216 INPP5BP32019 993 aa9.18□□□□□ -0.94
SKP1-208ENST00000521216 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SKP1-208ENST00000521216 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.942e-12■■□□□ 11.8
SKP1-208ENST00000521216 CMTR1Q8N1G2 835 aaKnown RBP9.18□□□□□ -0.94
SKP1-208ENST00000521216 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
SKP1-208ENST00000521216 FAM157BP0CG42 384 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 EPB42P16452 691 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 TNP2Q05952 138 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 PIK3R5Q8WYR1 880 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms