RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 HSPA6P17066 643 aa33.32■■■□□ 2.92
VEGFA-220ENST00000519767 STYK1Q6J9G0 422 aa33.32■■■□□ 2.92
VEGFA-220ENST00000519767 NMRK2Q9NPI5 230 aa33.32■■■□□ 2.92
VEGFA-220ENST00000519767 NIP7Q9Y221 180 aaKnown RBP eCLIP33.32■■■□□ 2.92
VEGFA-220ENST00000519767 SRGNP10124 158 aa33.3■■■□□ 2.92
VEGFA-220ENST00000519767 TMPOP42166 694 aaKnown RBP33.3■■■□□ 2.92
VEGFA-220ENST00000519767 ERVV-1B6SEH8 477 aa33.29■■■□□ 2.92
VEGFA-220ENST00000519767 RASSF7Q02833 373 aa33.29■■■□□ 2.92
VEGFA-220ENST00000519767 MASTLQ96GX5 879 aa33.29■■■□□ 2.92
VEGFA-220ENST00000519767 TSPYL4Q9UJ04 414 aa33.29■■■□□ 2.92
VEGFA-220ENST00000519767 DLG5Q8TDM6 1919 aa33.28■■■□□ 2.92
VEGFA-220ENST00000519767 RRP7AQ9Y3A4 280 aaKnown RBP33.28■■■□□ 2.92
VEGFA-220ENST00000519767 DLEC1Q9Y238 1755 aa33.27■■■□□ 2.92
VEGFA-220ENST00000519767 C21orf2O43822 256 aa33.27■■■□□ 2.92
VEGFA-220ENST00000519767 HLFQ16534 295 aa33.26■■■□□ 2.91
VEGFA-220ENST00000519767 C16orf71Q8IYS4 520 aaPredicted RBP33.26■■■□□ 2.91
VEGFA-220ENST00000519767 KLRG2A4D1S0 409 aaPredicted RBP33.25■■■□□ 2.91
VEGFA-220ENST00000519767 WDR43Q15061 677 aaKnown RBP eCLIP33.25■■■□□ 2.918e-10■□□□□ 9.2
VEGFA-220ENST00000519767 SOGA3Q5TF21 947 aa33.25■■■□□ 2.91
VEGFA-220ENST00000519767 NGEFQ8N5V2 710 aa33.25■■■□□ 2.91
VEGFA-220ENST00000519767 ERBB4Q15303 1308 aa33.25■■■□□ 2.91
VEGFA-220ENST00000519767 BCORQ6W2J9 1755 aa33.24■■■□□ 2.91
VEGFA-220ENST00000519767 NFKBIEO00221 500 aa33.24■■■□□ 2.91
VEGFA-220ENST00000519767 KIF6Q6ZMV9 814 aa33.24■■■□□ 2.91
VEGFA-220ENST00000519767 RBM46Q8TBY0 533 aaKnown RBP33.23■■■□□ 2.91
VEGFA-220ENST00000519767 RUNDC1Q96C34 613 aa33.23■■■□□ 2.91
VEGFA-220ENST00000519767 ANKRD31Q8N7Z5 1873 aa33.22■■■□□ 2.91
VEGFA-220ENST00000519767 NPR1P16066 1061 aa33.22■■■□□ 2.91
VEGFA-220ENST00000519767 GTF2E1P29083 439 aaPredicted RBP33.22■■■□□ 2.91
VEGFA-220ENST00000519767 PRELPP51888 382 aa33.22■■■□□ 2.91
VEGFA-220ENST00000519767 RRAGCQ9HB90 399 aa33.22■■■□□ 2.91
VEGFA-220ENST00000519767 ZNF219Q9P2Y4 722 aaPredicted RBP33.22■■■□□ 2.91
VEGFA-220ENST00000519767 MAP3K15Q6ZN16 1313 aa33.22■■■□□ 2.91
VEGFA-220ENST00000519767 KDM3BQ7LBC6 1761 aa33.21■■■□□ 2.91
VEGFA-220ENST00000519767 SBF1O95248 1867 aa33.21■■■□□ 2.91
VEGFA-220ENST00000519767 MYL6BP14649 208 aa33.21■■■□□ 2.91
VEGFA-220ENST00000519767 PRPF40BQ6NWY9 871 aaKnown RBP33.21■■■□□ 2.91
VEGFA-220ENST00000519767 NYXQ9GZU5 481 aa33.21■■■□□ 2.91
VEGFA-220ENST00000519767 GLTPD2A6NH11 291 aa33.2■■■□□ 2.91
VEGFA-220ENST00000519767 LTBP3Q9NS15 1303 aa33.19■■■□□ 2.9
VEGFA-220ENST00000519767 FAM177BA6PVY3 158 aa33.18■■■□□ 2.9
VEGFA-220ENST00000519767 NEUROD2Q15784 382 aa33.18■■■□□ 2.9
VEGFA-220ENST00000519767 TTLL7Q6ZT98 887 aa33.18■■■□□ 2.9
VEGFA-220ENST00000519767 CCDC146Q8IYE0 955 aa33.18■■■□□ 2.9
VEGFA-220ENST00000519767 PRKRIP1Q9H875 184 aaPredicted RBP33.18■■■□□ 2.9
VEGFA-220ENST00000519767 ADAMTS8Q9UP79 889 aa33.18■■■□□ 2.9
VEGFA-220ENST00000519767 APLP1P51693 650 aa33.17■■■□□ 2.9
VEGFA-220ENST00000519767 TAOK3Q9H2K8 898 aa33.17■■■□□ 2.9
VEGFA-220ENST00000519767 LAMB4A4D0S4 1761 aa33.16■■■□□ 2.9
VEGFA-220ENST00000519767 DPY19L2Q6NUT2 758 aa33.16■■■□□ 2.9
VEGFA-220ENST00000519767 EIF2S2P20042 333 aaKnown RBP33.15■■■□□ 2.9
VEGFA-220ENST00000519767 ALDH1B1P30837 517 aa33.15■■■□□ 2.9
VEGFA-220ENST00000519767 FSTL1Q12841 308 aa33.15■■■□□ 2.9
VEGFA-220ENST00000519767 C7orf43Q8WVR3 580 aa33.15■■■□□ 2.9
VEGFA-220ENST00000519767 VEGFAP15692 232 aaPredicted RBP33.14■■■□□ 2.9
VEGFA-220ENST00000519767 ERFEQ4G0M1 354 aa33.14■■■□□ 2.9
VEGFA-220ENST00000519767 CHL1O00533 1208 aa33.13■■■□□ 2.89
VEGFA-220ENST00000519767 GIGYF2Q6Y7W6 1299 aaKnown RBP33.13■■■□□ 2.89
VEGFA-220ENST00000519767 ZBTB3Q9H5J0 574 aa33.13■■■□□ 2.89
VEGFA-220ENST00000519767 TRIM35Q9UPQ4 493 aa33.12■■■□□ 2.89
VEGFA-220ENST00000519767 PDIA6Q15084 440 aa33.11■■■□□ 2.89
VEGFA-220ENST00000519767 CCDC93Q567U6 631 aa33.11■■■□□ 2.89
VEGFA-220ENST00000519767 ZNF34Q8IZ26 560 aa33.11■■■□□ 2.89
VEGFA-220ENST00000519767 COL11A2P13942 1736 aaPredicted RBP33.11■■■□□ 2.89
VEGFA-220ENST00000519767 LRP10Q7Z4F1 713 aa33.09■■■□□ 2.89
VEGFA-220ENST00000519767 GPTP24298 496 aa33.08■■■□□ 2.89
VEGFA-220ENST00000519767 CRY2Q49AN0 593 aa33.08■■■□□ 2.89
VEGFA-220ENST00000519767 RTKN2Q8IZC4 609 aa33.08■■■□□ 2.89
VEGFA-220ENST00000519767 IBTKQ9P2D0 1353 aaPredicted RBP33.08■■■□□ 2.89
VEGFA-220ENST00000519767 SLX4Q8IY92 1834 aa33.07■■■□□ 2.89
VEGFA-220ENST00000519767 PARP10Q53GL7 1025 aa33.07■■■□□ 2.88
VEGFA-220ENST00000519767 PPP1R42Q7Z4L9 355 aa33.07■■■□□ 2.88
VEGFA-220ENST00000519767 NUTM1Q86Y26 1132 aa33.07■■■□□ 2.88
VEGFA-220ENST00000519767 SUSD4Q5VX71 490 aa33.06■■■□□ 2.88
VEGFA-220ENST00000519767 SMC1BQ8NDV3 1235 aa33.06■■■□□ 2.88
VEGFA-220ENST00000519767 LAS1LQ9Y4W2 734 aaKnown RBP33.06■■■□□ 2.88
VEGFA-220ENST00000519767 UBN2Q6ZU65 1347 aa33.04■■■□□ 2.88
VEGFA-220ENST00000519767 FER1L6Q2WGJ9 1857 aa33.04■■■□□ 2.88
VEGFA-220ENST00000519767 HOXA10P31260 410 aaPredicted RBP33.03■■■□□ 2.88
VEGFA-220ENST00000519767 FKBP4Q02790 459 aaKnown RBP eCLIP33.03■■■□□ 2.88
VEGFA-220ENST00000519767 PROSER3Q2NL68 480 aa33.03■■■□□ 2.88
VEGFA-220ENST00000519767 DDX21Q9NR30 783 aaKnown RBP eCLIP33.03■■■□□ 2.88
VEGFA-220ENST00000519767 TNRC6CQ9HCJ0 1690 aaKnown RBP33.03■■■□□ 2.88
VEGFA-220ENST00000519767 ZEB1P37275 1124 aaPredicted RBP33.02■■■□□ 2.88
VEGFA-220ENST00000519767 COPS6Q7L5N1 327 aa33.02■■■□□ 2.88
VEGFA-220ENST00000519767 RPGRQ92834 1020 aaKnown RBP33.02■■■□□ 2.88
VEGFA-220ENST00000519767 CFAP44Q96MT7 982 aa33.02■■■□□ 2.88
VEGFA-220ENST00000519767 NUP98P52948 1817 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 HOXB7P09629 217 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 HSP90AB3PQ58FF7 597 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 CC2D2BQ6DHV5 1058 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 NECTIN2Q92692 538 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 RIC1Q4ADV7 1423 aa33.01■■■□□ 2.87
VEGFA-220ENST00000519767 NTSR2O95665 410 aa33■■■□□ 2.87
VEGFA-220ENST00000519767 ANXA1P04083 346 aa33■■■□□ 2.87
VEGFA-220ENST00000519767 UTP14AQ9BVJ6 771 aaKnown RBP33■■■□□ 2.87
VEGFA-220ENST00000519767 CCDC88AQ3V6T2 1871 aa32.99■■■□□ 2.87
VEGFA-220ENST00000519767 ABCC12Q96J65 1359 aa32.99■■■□□ 2.87
VEGFA-220ENST00000519767 GRIPAP1Q4V328 841 aa32.99■■■□□ 2.87
VEGFA-220ENST00000519767 POTECB2RU33 542 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms