RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 DDX54Q8TDD1 881 aaKnown RBP9.95□□□□□ -0.82
PCM1-212ENST00000519253 ERO1AQ96HE7 468 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
PCM1-212ENST00000519253 GOLGA6L9A6NEM1 432 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 DDIT3P35638 169 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 FILIP1LQ4L180 1135 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 SRRTQ9BXP5 876 aaKnown RBP9.95□□□□□ -0.82
PCM1-212ENST00000519253 DNAJC25Q9H1X3 360 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 RAD50Q92878 1312 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 CFAP100Q494V2 611 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 RAPGEF3O95398 923 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 U2AF2P26368 475 aaKnown RBP eCLIP9.95□□□□□ -0.822e-7■■■■□ 20.5
PCM1-212ENST00000519253 LUZP1Q86V48 1076 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 NECAB1Q8N987 351 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
PCM1-212ENST00000519253 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 RASSF8Q8NHQ8 419 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 GBP3Q9H0R5 595 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 KIAA0232Q92628 1395 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 SAMD9LQ8IVG5 1584 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 RTL1A6NKG5 1358 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 SGSM2O43147 1006 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 WASHC4Q2M389 1173 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
PCM1-212ENST00000519253 KIF2CQ99661 725 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 CTNNA3Q9UI47 895 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 ADCY10Q96PN6 1610 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 NFXL1Q6ZNB6 911 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
PCM1-212ENST00000519253 RBM8AQ9Y5S9 174 aaKnown RBP9.94□□□□□ -0.82
PCM1-212ENST00000519253 RGS12O14924 1447 aa9.94□□□□□ -0.82
PCM1-212ENST00000519253 PES1O00541 588 aaKnown RBP9.93□□□□□ -0.82
PCM1-212ENST00000519253 SIRT2Q8IXJ6 389 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 TXLNBQ8N3L3 684 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 SIL1Q9H173 461 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 PIP4K2AP48426 406 aaPredicted RBP9.93□□□□□ -0.82
PCM1-212ENST00000519253 KRT24Q2M2I5 525 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 PPFIBP1Q86W92 1011 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 GTF2F1P35269 517 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCM1-212ENST00000519253 BOLA2Q9H3K6 86 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 SNX14Q9Y5W7 946 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 FAM135BQ49AJ0 1406 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 CCDC69A6NI79 296 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 EIF4A2Q14240 407 aaKnown RBP9.93□□□□□ -0.82
PCM1-212ENST00000519253 TMC6Q7Z403 805 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 TSC1Q92574 1164 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 APPP05067 770 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 TOP1P11387 765 aaKnown RBP9.93□□□□□ -0.82
PCM1-212ENST00000519253 ZNF75DP51815 510 aa9.93□□□□□ -0.82
PCM1-212ENST00000519253 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
PCM1-212ENST00000519253 CYP2E1P05181 493 aaPredicted RBP9.92□□□□□ -0.82
PCM1-212ENST00000519253 SLC3A2P08195 630 aaKnown RBP9.92□□□□□ -0.82
PCM1-212ENST00000519253 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 CDKL5O76039 1030 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 ZNF530Q6P9A1 599 aaPredicted RBP9.92□□□□□ -0.82
PCM1-212ENST00000519253 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 KIAA1524Q8TCG1 905 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 PTCH1Q13635 1447 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 CD109Q6YHK3 1445 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 IGSF3O75054 1194 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 TM6SF1Q9BZW5 370 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 NPATQ14207 1427 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 ABTB2Q8N961 1025 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
PCM1-212ENST00000519253 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
PCM1-212ENST00000519253 POTEB2H3BUK9 544 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 POLR3GO15318 223 aaPredicted RBP9.91□□□□□ -0.82
PCM1-212ENST00000519253 FAM193AP78312 1265 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 SYCP1Q15431 976 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 NOC3LQ8WTT2 800 aaKnown RBP9.91□□□□□ -0.82
PCM1-212ENST00000519253 RUFY1Q96T51 708 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 CBX8Q9HC52 389 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 PALD1Q9ULE6 856 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 ZNF853P0CG23 659 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 ABCC1P33527 1531 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 LRRIQ1Q96JM4 1722 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 BTBD11A6QL63 1104 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 CASQ1P31415 396 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
PCM1-212ENST00000519253 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
PCM1-212ENST00000519253 BRF1Q92994 677 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 CCDC8Q9H0W5 538 aaPredicted RBP9.9□□□□□ -0.82
PCM1-212ENST00000519253 PI4KAP2A4QPH2 592 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 PI4KAP1Q8N8J0 262 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 TMEM87AQ8NBN3 555 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 C8orf76Q96K31 380 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 UNC13BO14795 1591 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 YTHDC2Q9H6S0 1430 aaKnown RBP9.9□□□□□ -0.82
PCM1-212ENST00000519253 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 CREB3L3Q68CJ9 461 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 MRPS27Q92552 414 aaKnown RBP9.9□□□□□ -0.82
PCM1-212ENST00000519253 CCDC47Q96A33 483 aaKnown RBP9.9□□□□□ -0.82
PCM1-212ENST00000519253 CHAMP1Q96JM3 812 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 NUTM2GQ5VZR2 741 aa9.9□□□□□ -0.82
PCM1-212ENST00000519253 ATP7AQ04656 1500 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms