RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 H3BRB1 525 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 DGKZQ13574 1117 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 IER5Q5VY09 327 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 PGBD3Q8N328 593 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 ZIC5Q96T25 663 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 TUT1Q9H6E5 874 aaKnown RBP7.98□□□□□ -1.13
SQLE-202ENST00000518604 NEUROD4Q9HD90 331 aa7.98□□□□□ -1.13
SQLE-202ENST00000518604 SENP3-EIF4A1A0A087X0R7 540 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 SLC35F4A4IF30 521 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 PTSQ03393 145 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 NOM1Q5C9Z4 860 aaKnown RBP7.97□□□□□ -1.13
SQLE-202ENST00000518604 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
SQLE-202ENST00000518604 NLRP8Q86W28 1048 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 IFT43Q96FT9 208 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 GMCL1Q96IK5 515 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 ANO2Q9NQ90 1003 aa7.97□□□□□ -1.13
SQLE-202ENST00000518604 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
SQLE-202ENST00000518604 POTECB2RU33 542 aa7.96□□□□□ -1.14
SQLE-202ENST00000518604 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
SQLE-202ENST00000518604 TGFBR3LH3BV60 316 aa7.96□□□□□ -1.14
SQLE-202ENST00000518604 H7C1W4 665 aa7.96□□□□□ -1.14
SQLE-202ENST00000518604 ECM1Q16610 540 aa7.96□□□□□ -1.14
SQLE-202ENST00000518604 SUSD3Q96L08 255 aa7.96□□□□□ -1.14
SQLE-202ENST00000518604 BIN2Q9UBW5 565 aaPredicted RBP7.96□□□□□ -1.14
SQLE-202ENST00000518604 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 MTMR3Q13615 1198 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 EFHC2Q5JST6 749 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 GAS2L1Q99501 681 aaPredicted RBP7.95□□□□□ -1.14
SQLE-202ENST00000518604 FAM13BQ9NYF5 915 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 KLK14Q9P0G3 267 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
SQLE-202ENST00000518604 MPSTP25325 297 aa7.94□□□□□ -1.14
SQLE-202ENST00000518604 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
SQLE-202ENST00000518604 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
SQLE-202ENST00000518604 SAMD5Q5TGI4 173 aa7.94□□□□□ -1.14
SQLE-202ENST00000518604 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
SQLE-202ENST00000518604 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
SQLE-202ENST00000518604 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
SQLE-202ENST00000518604 FIGNL1Q6PIW4 674 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 ETFBKMTQ8IXQ9 262 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 RUBCNLQ9H714 662 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 GPAMQ9HCL2 828 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
SQLE-202ENST00000518604 MICAL2O94851 1124 aa7.92□□□□□ -1.14
SQLE-202ENST00000518604 ERCC3P19447 782 aa7.92□□□□□ -1.14
SQLE-202ENST00000518604 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
SQLE-202ENST00000518604 LRRC69Q6ZNQ3 347 aa7.92□□□□□ -1.14
SQLE-202ENST00000518604 TREML1Q86YW5 311 aa7.92□□□□□ -1.14
SQLE-202ENST00000518604 TRIM22Q8IYM9 498 aa7.92□□□□□ -1.14
SQLE-202ENST00000518604 DMGDHQ9UI17 866 aaKnown RBP7.92□□□□□ -1.14
SQLE-202ENST00000518604 RPLP1P05386 114 aaKnown RBP7.91□□□□□ -1.14
SQLE-202ENST00000518604 MARSP56192 900 aaKnown RBP7.91□□□□□ -1.14
SQLE-202ENST00000518604 RIPOR1Q6ZS17 1223 aa7.91□□□□□ -1.14
SQLE-202ENST00000518604 BTLAQ7Z6A9 289 aa7.91□□□□□ -1.14
SQLE-202ENST00000518604 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
SQLE-202ENST00000518604 C11orf16Q9NQ32 467 aa7.91□□□□□ -1.14
SQLE-202ENST00000518604 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
SQLE-202ENST00000518604 ZBTB39O15060 712 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 NDUFB5O43674 189 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 ITGA6P23229 1130 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 ZAP70P43403 619 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 USP5P45974 858 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 AAMPQ13685 434 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 HSH2DQ96JZ2 352 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 NUCKS1Q9H1E3 243 aaKnown RBP7.9□□□□□ -1.14
SQLE-202ENST00000518604 BRPF3Q9ULD4 1205 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 PCDHGC4Q9Y5F7 938 aa7.9□□□□□ -1.14
SQLE-202ENST00000518604 EPB42P16452 691 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 PCSK2P16519 638 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 MZF1P28698 734 aaPredicted RBP7.89□□□□□ -1.15
SQLE-202ENST00000518604 INPP5BP32019 993 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 IDH3AP50213 366 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 ARSDP51689 593 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 FAM26DQ5JW98 314 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 RBCK1Q9BYM8 510 aa7.89□□□□□ -1.15
SQLE-202ENST00000518604 ZCCHC2Q9C0B9 1178 aaKnown RBP7.89□□□□□ -1.15
SQLE-202ENST00000518604 OPLAHO14841 1288 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 FZD6O60353 706 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 TYRO3Q06418 890 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 LAMC2Q13753 1193 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 DBN1Q16643 649 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 ZSCAN29Q8IWY8 852 aaPredicted RBP7.88□□□□□ -1.15
SQLE-202ENST00000518604 NPAS3Q8IXF0 933 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 KLRG1Q96E93 195 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 CEP63Q96MT8 703 aa7.88□□□□□ -1.15
SQLE-202ENST00000518604 ATXN7O15265 892 aaPredicted RBP7.87□□□□□ -1.15
SQLE-202ENST00000518604 PPFIA3O75145 1194 aa7.87□□□□□ -1.15
SQLE-202ENST00000518604 KCNQ4P56696 695 aa7.87□□□□□ -1.15
SQLE-202ENST00000518604 PDE3BQ13370 1112 aa7.87□□□□□ -1.15
SQLE-202ENST00000518604 FOXR1Q6PIV2 292 aa7.87□□□□□ -1.15
SQLE-202ENST00000518604 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
SQLE-202ENST00000518604 NANOS1Q8WY41 292 aaKnown RBP7.87□□□□□ -1.15
SQLE-202ENST00000518604 MAPK1P28482 360 aa7.86□□□□□ -1.15
SQLE-202ENST00000518604 EHHADHQ08426 723 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms