RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RRAGCQ9HB90 399 aa6.26□□□□□ -1.41
HMGB1P19-201ENST00000517578 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
HMGB1P19-201ENST00000517578 MAP7D1Q3KQU3 841 aa6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 NLRP8Q86W28 1048 aa6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 NIFKQ9BYG3 293 aaKnown RBP6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 LAS1LQ9Y4W2 734 aaKnown RBP6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 PCDHGC4Q9Y5F7 938 aa6.25□□□□□ -1.41
HMGB1P19-201ENST00000517578 SHROOM4Q9ULL8 1493 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 ARAFP10398 606 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 EPXP11678 715 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 SOX11P35716 441 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 DGKGP49619 791 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 MTFR1Q15390 333 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 FIGNL1Q6PIW4 674 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 ALYREFQ86V81 257 aaKnown RBP6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 PROSER2Q86WR7 435 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 SLC4A9Q96Q91 983 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 SERTAD1Q9UHV2 236 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 BRPF3Q9ULD4 1205 aa6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 WRNQ14191 1432 aaPredicted RBP eCLIP6.24□□□□□ -1.41
HMGB1P19-201ENST00000517578 A0A1W2PNR3 127 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 DCDC2BA2VCK2 349 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 NEURL1BA8MQ27 555 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 PIK3CDO00329 1044 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 ATXN7O15265 892 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 AMPD1P23109 780 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 BAG6P46379 1132 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 TERF1P54274 439 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 TNP2Q05952 138 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 AIDAQ96BJ3 306 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 BTBD6Q96KE9 485 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 KLF15Q9UIH9 416 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 PRDM4Q9UKN5 801 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 PCDHGA11Q9Y5H2 935 aa6.23□□□□□ -1.41
HMGB1P19-201ENST00000517578 GOLGA6L3A6NEY3 463 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 CDK2AP1O14519 115 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 CLGNO14967 610 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 PTMAP06454 111 aaKnown RBP6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 GRIN2CQ14957 1233 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 AXDND1Q5T1B0 1012 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 ALG2Q9H553 416 aa6.22□□□□□ -1.41
HMGB1P19-201ENST00000517578 A6NJY4 79 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 GNB5O14775 395 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 SKIP12755 728 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 CD33P20138 364 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 FAM182BQ5T319 152 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 XP32Q5T750 250 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZDHHC3Q9NYG2 299 aa6.21□□□□□ -1.42
HMGB1P19-201ENST00000517578 A6NJR5 290 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 KHNYNO15037 678 aaKnown RBP6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 KIF20AO95235 890 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 NBPF1Q3BBV0 1214 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 ARSJQ5FYB0 599 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 CHSY3Q70JA7 882 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 FNBP4Q8N3X1 1017 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZIC5Q96T25 663 aa6.2□□□□□ -1.42
HMGB1P19-201ENST00000517578 FAM157BP0CG42 384 aa6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 ADH6P28332 368 aa6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 STRN4Q9NRL3 753 aa6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 CABP1Q9NZU7 370 aa6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 PARP3Q9Y6F1 533 aa6.19□□□□□ -1.42
HMGB1P19-201ENST00000517578 C1QTNF9BB2RNN3 333 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 EFSO43281 561 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 ANP32CO43423 234 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 FURINP09958 794 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 TATP17735 454 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 TXLNAP40222 546 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 CHRNA4P43681 627 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 SAMD5Q5TGI4 173 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 CD163Q86VB7 1156 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZDHHC1Q8WTX9 485 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 GLMNQ92990 594 aa6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZNF777Q9ULD5 760 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P19-201ENST00000517578 PIK3R2O00459 728 aa6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 TCERG1O14776 1098 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 EPHA4P54764 986 aa6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 PCBP4P57723 403 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 EML3Q32P44 896 aa6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZNF468Q5VIY5 522 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 DEPDC4Q8N2C3 294 aa6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 GTPBP4Q9BZE4 634 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 ZNF358Q9NW07 568 aa6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 SCHIP1Q9P0W5 487 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 ISY1Q9ULR0 285 aaKnown RBP6.17□□□□□ -1.42
HMGB1P19-201ENST00000517578 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 RGS3P49796 1198 aa6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 GTF2IP78347 998 aa6.16□□□□□ -1.42
HMGB1P19-201ENST00000517578 NCOA4Q13772 614 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms