RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DNAI2Q9GZS0 605 aa14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 RNF41Q9H4P4 317 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCDHGA6-201ENST00000517434 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 IL16Q14005 1332 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 KIF20AO95235 890 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 TRAF1Q13077 416 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 DACH1Q9UI36 760 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZSCAN12O43309 604 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC196A0A1B0GTZ2 297 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 MKNK2Q9HBH9 465 aa14.25□□□□□ -0.13
PCDHGA6-201ENST00000517434 GSTO1P78417 241 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 HSP90AB2PQ58FF8 381 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 NLRP3Q96P20 1036 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC183Q5T5S1 534 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZGPATQ8N5A5 531 aaKnown RBP14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 UPF3BQ9BZI7 483 aaKnown RBP14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 MCM3P25205 808 aa14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 RTCBQ9Y3I0 505 aaKnown RBP14.24□□□□□ -0.13
PCDHGA6-201ENST00000517434 URI1O94763 535 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 FLT4P35916 1363 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 BRPF1P55201 1214 aaPredicted RBP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 TBC1D2Q9BYX2 928 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 PARP3Q9Y6F1 533 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZNF76P36508 570 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 PAXBP1Q9Y5B6 917 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 SMTNL1A8MU46 457 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 HLA-DOAP06340 250 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 IVLP07476 585 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 UQCRFS1P1P0C7P4 283 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 NEFHP12036 1026 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 STIM1Q13586 685 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 TICAM2Q86XR7 235 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 TNPO1Q92973 898 aaKnown RBP14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
PCDHGA6-201ENST00000517434 LMAN1P49257 510 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 C16orf45Q96MC5 204 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 USP25Q9UHP3 1055 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 NF2P35240 595 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 ARHGAP29Q52LW3 1261 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 CCDC85AQ96PX6 553 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 MAGEC2Q9UBF1 373 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 RBM25P49756 843 aaKnown RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 SEC63Q9UGP8 760 aaKnown RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 UVSSAQ2YD98 709 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
PCDHGA6-201ENST00000517434 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 SPATA32Q96LK8 384 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 NAPBQ9H115 298 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 KDM6BO15054 1643 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 IBSPP21815 317 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 ME1P48163 572 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 KLHL40Q2TBA0 621 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
PCDHGA6-201ENST00000517434 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 GCP02774 474 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 HS1BP3Q53T59 392 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 CFAP45Q9UL16 551 aa14.21□□□□□ -0.14
PCDHGA6-201ENST00000517434 BCAR3O75815 825 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 FLIIQ13045 1269 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 ANKRD13DQ6ZTN6 518 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 CCDC148Q8NFR7 591 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 EYA3Q99504 573 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 GPTP24298 496 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 ANKRD18AQ8IVF6 992 aa14.2□□□□□ -0.14
PCDHGA6-201ENST00000517434 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms