RNA–Protein interactions for RNA: ENST00000517015.1

SNORA48.11-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 89 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.11-201ENST00000517015 NUDT16Q96DE0 195 aaKnown RBP3.48□□□□□ -1.85
SNORA48.11-201ENST00000517015 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
SNORA48.11-201ENST00000517015 CABP1Q9NZU7 370 aa3.48□□□□□ -1.85
SNORA48.11-201ENST00000517015 INPP5FQ9Y2H2 1132 aa3.48□□□□□ -1.85
SNORA48.11-201ENST00000517015 ADH1CP00326 375 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 CANXP27824 592 aaKnown RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 CBLBQ13191 982 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 GNL2Q13823 731 aaKnown RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 RTN1Q16799 776 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 C8orf34Q49A92 452 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 RC3H1Q5TC82 1133 aaKnown RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 MEI1Q5TIA1 1274 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 USPL1Q5W0Q7 1092 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 PPP1R18Q6NYC8 613 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 POTEAQ6S8J7 498 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 TREML1Q86YW5 311 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 ZNF295-AS1Q8N0V1 137 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 SLC43A3Q8NBI5 491 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 L3MBTL2Q969R5 705 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 IFT43Q96FT9 208 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 CDK15Q96Q40 435 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 HIRIP3Q9BW71 556 aaPredicted RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 GGNBP2Q9H3C7 697 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 FOXD3Q9UJU5 478 aaPredicted RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 DDX41Q9UJV9 622 aaKnown RBP3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 AK5Q9Y6K8 562 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 CADPSQ9ULU8 1353 aa3.47□□□□□ -1.85
SNORA48.11-201ENST00000517015 ADH1AP07327 375 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 EIF4BP23588 611 aaKnown RBP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 NOS2P35228 1153 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 ITGAEP38570 1179 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 TXLNAP40222 546 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 USP5P45974 858 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 ARID5AQ03989 594 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 TEAD4Q15561 434 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 C11orf91Q3C1V1 193 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 MCF2L2Q86YR7 1114 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 NBPF15Q8N660 670 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 KDF1Q8NAX2 398 aaPredicted RBP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 FBF1Q8TES7 1133 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 KLRG1Q96E93 195 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 XAGE2Q96GT9 111 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 CHMP4AQ9BY43 222 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 KRTAP3-3Q9BYR6 98 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 KRTAP3-2Q9BYR7 98 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 FHDC1Q9C0D6 1143 aaPredicted RBP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 CUEDC1Q9NWM3 386 aaPredicted RBP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 NLRP2Q9NX02 1062 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 GGT7Q9UJ14 662 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 SPG7Q9UQ90 795 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 BCS1LQ9Y276 419 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 USP20Q9Y2K6 914 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 TMA7Q9Y2S6 64 aaKnown RBP3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 HRH3Q9Y5N1 445 aa3.46□□□□□ -1.86
SNORA48.11-201ENST00000517015 MEN1O00255 615 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 CDK2AP1O14519 115 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 FGRP09769 529 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 PLA2G4AP47712 749 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 HIRAP54198 1017 aaPredicted RBP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 BMS1Q14692 1282 aaKnown RBP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 LHX8Q68G74 356 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 HS2ST1Q7LGA3 356 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 NOP9Q86U38 636 aaKnown RBP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 JAZF1Q86VZ6 243 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZNF654Q8IZM8 581 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 NLGN1Q8N2Q7 840 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 ANKLE1Q8NAG6 615 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 EPS8L3Q8TE67 593 aaKnown RBP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 HSH2DQ96JZ2 352 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 AGBL1Q96MI9 1066 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 GMLQ99445 158 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 ESYT1Q9BSJ8 1104 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 OSBPL7Q9BZF2 842 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 C12orf49Q9H741 205 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZSWIM4Q9H7M6 989 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 SRA1Q9HD15 236 aaKnown RBP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 PGPEP1Q9NXJ5 209 aa3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNORA48.11-201ENST00000517015 F6X3S4 739 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 SIAH2O43255 324 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 CPNE3O75131 537 aaKnown RBP3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 POLR3DP05423 398 aaPredicted RBP3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 USP17L7P0C7H9 530 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 PCSK2P16519 638 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 NCLP19338 710 aaKnown RBP3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 RELBQ01201 579 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 CENPCQ03188 943 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 PAK2Q13177 524 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 NR5A1Q13285 461 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 CLN3Q13286 438 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 TRIP4Q15650 581 aaPredicted RBP3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 SDE2Q6IQ49 451 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 ANKRD13AQ8IZ07 590 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 RHPN1Q8TCX5 695 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 OSBPL2Q9H1P3 480 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 NPHS2Q9NP85 383 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 COPRSQ9NQ92 184 aa3.44□□□□□ -1.86
SNORA48.11-201ENST00000517015 TBX22Q9Y458 520 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms