RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 LILRA6Q6PI73 481 aa3.48□□□□□ -1.85
SNORA40.13-201ENST00000516379 DMRTC2Q8IXT2 367 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.13-201ENST00000516379 SLC30A3Q99726 388 aa3.48□□□□□ -1.85
SNORA40.13-201ENST00000516379 B8ZZF3 427 aa3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 GSC2O15499 205 aa3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 AFF1P51825 1210 aaKnown RBP3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 KRTAP1-1Q07627 177 aa3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 ARSJQ5FYB0 599 aaPredicted RBP3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
SNORA40.13-201ENST00000516379 PRR19A6NJB7 356 aa3.46□□□□□ -1.86
SNORA40.13-201ENST00000516379 GRIK1P39086 918 aa3.46□□□□□ -1.86
SNORA40.13-201ENST00000516379 FBXO11Q86XK2 927 aa3.46□□□□□ -1.86
SNORA40.13-201ENST00000516379 PARP9Q8IXQ6 854 aa3.46□□□□□ -1.86
SNORA40.13-201ENST00000516379 PCDHB11Q9Y5F2 797 aa3.46□□□□□ -1.86
SNORA40.13-201ENST00000516379 PTCD1O75127 700 aaKnown RBP3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 IGF2-ASQ6U949 168 aa3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 ZNF295-AS1Q8N0V1 137 aa3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 AIDAQ96BJ3 306 aa3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 JPH1Q9HDC5 661 aaPredicted RBP3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 PCDHB9Q9Y5E1 797 aa3.45□□□□□ -1.86
SNORA40.13-201ENST00000516379 JUNBP17275 347 aaPredicted RBP3.44□□□□□ -1.86
SNORA40.13-201ENST00000516379 ESCO1Q5FWF5 840 aa3.44□□□□□ -1.86
SNORA40.13-201ENST00000516379 FBXO31Q5XUX0 539 aaPredicted RBP3.44□□□□□ -1.86
SNORA40.13-201ENST00000516379 DTWD1Q8N5C7 304 aa3.44□□□□□ -1.86
SNORA40.13-201ENST00000516379 RAXQ9Y2V3 346 aa3.44□□□□□ -1.86
SNORA40.13-201ENST00000516379 STAU1O95793 577 aaKnown RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 CLK2P49760 499 aaKnown RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 SFSWAPQ12872 951 aaKnown RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 TLR1Q15399 786 aa3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 NUDT8Q8WV74 236 aa3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 ESF1Q9H501 851 aaKnown RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 ETNK1Q9HBU6 452 aa3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 HMX1Q9NP08 348 aaPredicted RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 ZDHHC3Q9NYG2 299 aa3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 ATP1B4Q9UN42 357 aaPredicted RBP3.43□□□□□ -1.86
SNORA40.13-201ENST00000516379 ALX3O95076 343 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 SPEM2Q0P670 501 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 COL19A1Q14993 1142 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 Q6ZS46 218 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 RAB44Q7Z6P3 723 aaPredicted RBP3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 PNMA1Q8ND90 353 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 NIFKQ9BYG3 293 aaKnown RBP3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 AKTIPQ9H8T0 292 aa3.42□□□□□ -1.86
SNORA40.13-201ENST00000516379 SOCS7O14512 581 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 NFIAQ12857 509 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 NBPF1Q3BBV0 1214 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 MSL1Q68DK7 614 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 NFXL1Q6ZNB6 911 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 TMEM130Q8N3G9 435 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 CDCA7Q9BWT1 371 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 STOML1Q9UBI4 398 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 SLC6A14Q9UN76 642 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 GJA3Q9Y6H8 435 aa3.41□□□□□ -1.86
SNORA40.13-201ENST00000516379 DLL1O00548 723 aa3.4□□□□□ -1.87
SNORA40.13-201ENST00000516379 DEAF1O75398 565 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.13-201ENST00000516379 FBXO45P0C2W1 286 aa3.4□□□□□ -1.87
SNORA40.13-201ENST00000516379 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.13-201ENST00000516379 CILP2Q8IUL8 1156 aa3.4□□□□□ -1.87
SNORA40.13-201ENST00000516379 ZBBXA8MT70 800 aa3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 F8W735 103 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 NEUROD1Q13562 356 aa3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 GRIK5Q16478 980 aa3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 PSAPL1Q6NUJ1 521 aa3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 NAGPAQ9UK23 515 aa3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.13-201ENST00000516379 MYCP01106 439 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.13-201ENST00000516379 RNF43Q68DV7 783 aa3.38□□□□□ -1.87
SNORA40.13-201ENST00000516379 POLR3EQ9NVU0 708 aa3.38□□□□□ -1.87
SNORA40.13-201ENST00000516379 RGS9O75916 674 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 PAPLNO95428 1278 aa3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 HOXA10P31260 410 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 MCCD1P59942 119 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 BARGINQ6ZT62 677 aa3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 ARMC10Q8N2F6 343 aa3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 C7orf43Q8WVR3 580 aa3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 UBL7Q96S82 380 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 DBNDD2Q9BQY9 259 aa3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 IQSEC3Q9UPP2 1182 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.13-201ENST00000516379 FARP2O94887 1054 aaPredicted RBP3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 SCNN1DP51172 638 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 LRRC69Q6ZNQ3 347 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 BICDL1Q6ZP65 573 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 TRIM42Q8IWZ5 723 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 CCDC85AQ96PX6 553 aaPredicted RBP3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 TRIM34Q9BYJ4 488 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 UBE2OQ9C0C9 1292 aaKnown RBP3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 MRPL18Q9H0U6 180 aaKnown RBP3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 C7orf69Q9H7B7 122 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 CCDC39Q9UFE4 941 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 USP3Q9Y6I4 520 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 CARMIL2Q6F5E8 1435 aa3.36□□□□□ -1.87
SNORA40.13-201ENST00000516379 DHX15O43143 795 aaKnown RBP3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 INHAP05111 366 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 TXLNAP40222 546 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 SMTNP53814 917 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 KCNQ4P56696 695 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 PKN1Q16512 942 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 LCNL1Q6ZST4 164 aa3.35□□□□□ -1.87
SNORA40.13-201ENST00000516379 TTLL10Q6ZVT0 673 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms