RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 CRISPLD1Q9H336 500 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TUT1Q9H6E5 874 aaKnown RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 QTRT2Q9H974 415 aaKnown RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DCTN4Q9UJW0 460 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 AMOTL2Q9Y2J4 779 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 HCN4Q9Y3Q4 1203 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 USP3Q9Y6I4 520 aa3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DNMT3AQ9Y6K1 912 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TGFBR3LH3BV60 316 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NEFLP07196 543 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BMP1P13497 986 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EPB42P16452 691 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ITGAEP38570 1179 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EHHADHQ08426 723 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 COL19A1Q14993 1142 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ARSJQ5FYB0 599 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BICDL1Q6ZP65 573 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TTC16Q8NEE8 873 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 NGLY1Q96IV0 654 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TRIM47Q96LD4 638 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DNMT3LQ9UJW3 386 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 BRPF3Q9ULD4 1205 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 GJA3Q9Y6H8 435 aa3.36□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FIGNL2A6NMB9 653 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MSX1P28360 303 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MZF1P28698 734 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TXLNAP40222 546 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PHKA2P46019 1235 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EIF1AXP47813 144 aaKnown RBP3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ARHGAP4P98171 946 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZNF211Q13398 564 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DGKZQ13574 1117 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 AAMPQ13685 434 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 LAMC2Q13753 1193 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SAMD5Q5TGI4 173 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 C7orf43Q8WVR3 580 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PIK3R5Q8WYR1 880 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SUSD3Q96L08 255 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 DMRTB1Q96MA1 342 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ZIC5Q96T25 663 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 RBCK1Q9BYM8 510 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SAP130Q9H0E3 1048 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 EFCC1Q9HA90 598 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 LRFN2Q9ULH4 789 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FNDC3AQ9Y2H6 1198 aaKnown RBP3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PARP3Q9Y6F1 533 aa3.35□□□□□ -1.87
RNU6-1041P-201ENST00000516254 A0A1W2PNR3 127 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SLC35F4A4IF30 521 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 TNFRSF10BO14763 440 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MICAL2O94851 1124 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 RHOQP17081 205 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ATP4AP20648 1035 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 MPSTP25325 297 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 SCNN1AP37088 669 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ARSDP51689 593 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 FOXR1Q6PIV2 292 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 CAPN12Q6ZSI9 719 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ASB16Q96NS5 453 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ANO2Q9NQ90 1003 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 PHF24Q9UPV7 400 aa3.34□□□□□ -1.87
RNU6-1041P-201ENST00000516254 ST8SIA5O15466 376 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FAM157BP0CG42 384 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 MAPK1P28482 360 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZAP70P43403 619 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 KCNQ4P56696 695 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PTSQ03393 145 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ECM1Q16610 540 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SH3PXD2AQ5TCZ1 1133 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 BTLAQ7Z6A9 289 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TREML1Q86YW5 311 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NPAS3Q8IXF0 933 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ETFBKMTQ8IXQ9 262 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TRIM22Q8IYM9 498 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RGL4Q8IZJ4 473 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RGS22Q8NE09 1264 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GAS2L1Q99501 681 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 KLK14Q9P0G3 267 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DMGDHQ9UI17 866 aaKnown RBP3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PCDHGC4Q9Y5F7 938 aa3.33□□□□□ -1.88
RNU6-1041P-201ENST00000516254 C11orf95C9JLR9 678 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FZD6O60353 706 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 INPP5BP32019 993 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 IDH3AP50213 366 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NEUROD1Q13562 356 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 MTMR3Q13615 1198 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZNF326Q5BKZ1 582 aaKnown RBP3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PDE12Q6L8Q7 609 aaKnown RBP3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 XKR5Q6UX68 686 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DNAJC14Q6Y2X3 702 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 LRRC69Q6ZNQ3 347 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RIPOR1Q6ZS17 1223 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CCDC155Q8N6L0 562 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TMC1Q8TDI8 760 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PMEPA1Q969W9 287 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ALKBH8Q96BT7 664 aaKnown RBP3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CEP63Q96MT8 703 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TRERF1Q96PN7 1200 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FAM129BQ96TA1 746 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CFHR5Q9BXR6 569 aa3.32□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NUCKS1Q9H1E3 243 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms