RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 TM4SF1P30408 202 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 NFIXQ14938 502 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSBP2-219ENST00000515395 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
SSBP2-219ENST00000515395 RGL2O15211 777 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 NPHP1O15259 732 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 ANXA1P04083 346 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
SSBP2-219ENST00000515395 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
SSBP2-219ENST00000515395 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 SERPINB2P05120 415 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 DDR1Q08345 913 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
SSBP2-219ENST00000515395 PDIA6Q15084 440 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
SSBP2-219ENST00000515395 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
SSBP2-219ENST00000515395 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 ANKRD36CQ5JPF3 1778 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 TTLL7Q6ZT98 887 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
SSBP2-219ENST00000515395 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
SSBP2-219ENST00000515395 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
SSBP2-219ENST00000515395 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
SSBP2-219ENST00000515395 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
SSBP2-219ENST00000515395 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSBP2-219ENST00000515395 E9PSI1 815 aa13.15□□□□□ -0.3
SSBP2-219ENST00000515395 HLFQ16534 295 aa13.15□□□□□ -0.3
SSBP2-219ENST00000515395 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
SSBP2-219ENST00000515395 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
SSBP2-219ENST00000515395 ARFGEF2Q9Y6D5 1785 aa13.14□□□□□ -0.31
SSBP2-219ENST00000515395 TGFB2P61812 414 aa13.14□□□□□ -0.31
SSBP2-219ENST00000515395 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
SSBP2-219ENST00000515395 NBPF5PQ86XG9 351 aaPredicted RBP13.14□□□□□ -0.31
SSBP2-219ENST00000515395 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
SSBP2-219ENST00000515395 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
SSBP2-219ENST00000515395 GTF2E1P29083 439 aaPredicted RBP13.13□□□□□ -0.31
SSBP2-219ENST00000515395 ST5P78524 1137 aa13.13□□□□□ -0.31
SSBP2-219ENST00000515395 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSBP2-219ENST00000515395 GPR162Q16538 588 aa13.13□□□□□ -0.31
SSBP2-219ENST00000515395 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
SSBP2-219ENST00000515395 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
SSBP2-219ENST00000515395 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
SSBP2-219ENST00000515395 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
SSBP2-219ENST00000515395 GPTP24298 496 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
SSBP2-219ENST00000515395 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
SSBP2-219ENST00000515395 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
SSBP2-219ENST00000515395 VAMP4O75379 141 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
SSBP2-219ENST00000515395 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
SSBP2-219ENST00000515395 PDE6BP35913 854 aa13.1□□□□□ -0.31
SSBP2-219ENST00000515395 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
SSBP2-219ENST00000515395 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
SSBP2-219ENST00000515395 BRIP1Q9BX63 1249 aa13.1□□□□□ -0.31
SSBP2-219ENST00000515395 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
SSBP2-219ENST00000515395 CHD4Q14839 1912 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 H0YIN7 160 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 DPEP1P16444 411 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
SSBP2-219ENST00000515395 PIM2Q9P1W9 311 aa13.08□□□□□ -0.31
SSBP2-219ENST00000515395 WWC3Q9ULE0 1092 aa13.08□□□□□ -0.31
SSBP2-219ENST00000515395 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
SSBP2-219ENST00000515395 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
SSBP2-219ENST00000515395 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
SSBP2-219ENST00000515395 GRIN3BO60391 1043 aa13.07□□□□□ -0.32
SSBP2-219ENST00000515395 CHRNA5P30532 468 aa13.07□□□□□ -0.32
SSBP2-219ENST00000515395 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
SSBP2-219ENST00000515395 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
SSBP2-219ENST00000515395 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
SSBP2-219ENST00000515395 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
SSBP2-219ENST00000515395 FLIIQ13045 1269 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms