RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 RTL1A6NKG5 1358 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 RBM25P49756 843 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 PTPRCP08575 1304 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 CAMTA1Q9Y6Y1 1673 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 LRCH2Q5VUJ6 765 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 PROM2Q8N271 834 aa8.98□□□□□ -0.97
PDLIM5-219ENST00000514743 CTR9Q6PD62 1173 aa8.97□□□□□ -0.97
PDLIM5-219ENST00000514743 CALRP27797 417 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-219ENST00000514743 NLRP6P59044 892 aa8.97□□□□□ -0.97
PDLIM5-219ENST00000514743 ICE2Q659A1 982 aa8.97□□□□□ -0.97
PDLIM5-219ENST00000514743 DCTPP1Q9H773 170 aa8.97□□□□□ -0.97
PDLIM5-219ENST00000514743 GSPT1P15170 499 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 MTA1Q13330 715 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 ANKRD44Q8N8A2 993 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 ITFG2Q969R8 447 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 CCDC97Q96F63 343 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 KIF2CQ99661 725 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 SIPA1L3O60292 1781 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 RGPD5Q99666 1765 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 AMPHP49418 695 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 NUTM2GQ5VZR2 741 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 CEP85Q6P2H3 762 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 G2E3Q7L622 706 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.97
PDLIM5-219ENST00000514743 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 DHX16O60231 1041 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 NOP2P46087 812 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 GABPB1Q06547 395 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 U3KPZ7 1027 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-219ENST00000514743 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 MEIS3Q99687 375 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 TBC1D9Q6ZT07 1266 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 PLEKHM2Q8IWE5 1019 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 EXOC8Q8IYI6 725 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 TSPYL4Q9UJ04 414 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 SLIT3O75094 1523 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 MAP3K5Q99683 1374 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 HTATSF1O43719 755 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 BRMS1Q9HCU9 246 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 SUFUQ9UMX1 484 aa8.95□□□□□ -0.98
PDLIM5-219ENST00000514743 CRYBG1Q9Y4K1 1723 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 DDIT3P35638 169 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 PAIP2Q9BPZ3 127 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 ISY1Q9ULR0 285 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 CCDC173Q0VFZ6 552 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 ABTB2Q8N961 1025 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 MNS1Q8NEH6 495 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 SPOCK2Q92563 424 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 CIZ1Q9ULV3 898 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-219ENST00000514743 ADAMTS7Q9UKP4 1686 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 PXDNLA1KZ92 1463 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 ERICH4A6NGS2 130 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 GUCY2CP25092 1073 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 C16orf71Q8IYS4 520 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 IL17REQ8NFR9 667 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 RTF1Q92541 710 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 PHF8Q9UPP1 1060 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 NCAPD2Q15021 1401 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 OTUD7AQ8TE49 926 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 CEMIPQ8WUJ3 1361 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 ALS2Q96Q42 1657 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 F6X3S4 739 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 SNX21Q969T3 373 aa8.93□□□□□ -0.98
PDLIM5-219ENST00000514743 TTC22Q5TAA0 569 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■■■■ 86.5
PDLIM5-219ENST00000514743 NRDCO43847 1150 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 RBM5P52756 815 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 PPP2R5AQ15172 486 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 ZC3H12AQ5D1E8 599 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 PDCL2Q8N4E4 241 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 USHBP1Q8N6Y0 703 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 KIF1AQ12756 1690 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 CD2BP2O95400 341 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 FOXD4L5Q5VV16 416 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 FOXD4L4Q8WXT5 416 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 RASSF4Q9H2L5 321 aa8.92□□□□□ -0.98
PDLIM5-219ENST00000514743 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 AK9Q5TCS8 1911 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 SCP2P22307 547 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 ANKLE2Q86XL3 938 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 TNPO1Q92973 898 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 PXDNQ92626 1479 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 SMARCA5O60264 1052 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 NKX1-1Q15270 411 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 IP6K1Q92551 441 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 CXorf56Q9H5V9 222 aa8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-219ENST00000514743 CCDC189A1A4V9 331 aa8.9□□□□□ -0.98
PDLIM5-219ENST00000514743 RAD21O60216 631 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms