RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 IDH1O75874 414 aaKnown RBP14.26□□□□□ -0.13
PRDM16-207ENST00000512462 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
PRDM16-207ENST00000512462 VPS37DQ86XT2 251 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 CCDC82Q8N4S0 544 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 USP26Q9BXU7 913 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 FAM13BQ9NYF5 915 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 CCT2P78371 535 aaKnown RBP14.26□□□□□ -0.13
PRDM16-207ENST00000512462 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 IP6K1Q92551 441 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 ANKRD26Q9UPS8 1709 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
PRDM16-207ENST00000512462 PHF14O94880 888 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 CHST3Q7LGC8 479 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 BECN2A8MW95 431 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 ZNF592Q92610 1267 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 USP44Q9H0E7 712 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 MED14O60244 1454 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 TTC39AQ5SRH9 613 aa14.25□□□□□ -0.13
PRDM16-207ENST00000512462 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
PRDM16-207ENST00000512462 GRM8O00222 908 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 AKAP4Q5JQC9 854 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
PRDM16-207ENST00000512462 ABCC4O15439 1325 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 RAD21O60216 631 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 TRDNQ13061 729 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
PRDM16-207ENST00000512462 IQSEC3Q9UPP2 1182 aaPredicted RBP14.24□□□□□ -0.13
PRDM16-207ENST00000512462 RNMTO43148 476 aaKnown RBP14.24□□□□□ -0.13
PRDM16-207ENST00000512462 FAM173BQ6P4H8 233 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 PIBF1Q8WXW3 757 aa14.24□□□□□ -0.13
PRDM16-207ENST00000512462 CHMLP26374 656 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 SBNO1A3KN83 1393 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
PRDM16-207ENST00000512462 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
PRDM16-207ENST00000512462 RTL1A6NKG5 1358 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 PSMA5P28066 241 aa14.23□□□□□ -0.13
PRDM16-207ENST00000512462 KSR2Q6VAB6 950 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 PAXIP1Q6ZW49 1069 aaPredicted RBP14.22□□□□□ -0.13
PRDM16-207ENST00000512462 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
PRDM16-207ENST00000512462 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
PRDM16-207ENST00000512462 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
PRDM16-207ENST00000512462 ESPNB1AK53 854 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 A1BGP04217 495 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 MCM2P49736 904 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 SLC4A8Q2Y0W8 1093 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 TIMM10P62072 90 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 CCDC129Q6ZRS4 1044 aa14.22□□□□□ -0.13
PRDM16-207ENST00000512462 GOLGA6L19H0YKK7 550 aa14.21□□□□□ -0.13
PRDM16-207ENST00000512462 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.13
PRDM16-207ENST00000512462 HELBQ8NG08 1087 aaPredicted RBP14.21□□□□□ -0.13
PRDM16-207ENST00000512462 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
PRDM16-207ENST00000512462 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
PRDM16-207ENST00000512462 HTATSF1O43719 755 aaKnown RBP14.21□□□□□ -0.13
PRDM16-207ENST00000512462 FAM227BQ96M60 508 aa14.21□□□□□ -0.13
PRDM16-207ENST00000512462 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
PRDM16-207ENST00000512462 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.14
PRDM16-207ENST00000512462 IFIT1P09914 478 aaKnown RBP14.2□□□□□ -0.14
PRDM16-207ENST00000512462 METTL24Q5JXM2 366 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 RASSF8Q8NHQ8 419 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 SDF4Q9BRK5 362 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 TSPY26PQ9H489 355 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 GJB2P29033 226 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 EIF4A1P60842 406 aaKnown RBP14.2□□□□□ -0.14
PRDM16-207ENST00000512462 CCDC158Q5M9N0 1113 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 ZNF853P0CG23 659 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 ATP7BP35670 1465 aa14.2□□□□□ -0.14
PRDM16-207ENST00000512462 SNRPA1P09661 255 aaKnown RBP14.19□□□□□ -0.14
PRDM16-207ENST00000512462 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
PRDM16-207ENST00000512462 TBC1D2BQ9UPU7 963 aa14.19□□□□□ -0.14
PRDM16-207ENST00000512462 RBM8AQ9Y5S9 174 aaKnown RBP14.19□□□□□ -0.14
PRDM16-207ENST00000512462 MBD3O95983 291 aa14.19□□□□□ -0.14
PRDM16-207ENST00000512462 NMIQ13287 307 aaPredicted RBP14.19□□□□□ -0.14
PRDM16-207ENST00000512462 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
PRDM16-207ENST00000512462 SUCLG2Q96I99 432 aa14.19□□□□□ -0.14
PRDM16-207ENST00000512462 C19orf44Q9H6X5 657 aa14.19□□□□□ -0.14
PRDM16-207ENST00000512462 ZNF790Q6PG37 636 aa14.19□□□□□ -0.14
PRDM16-207ENST00000512462 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 LIMCH1Q9UPQ0 1083 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 KNDC1Q76NI1 1749 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 UBR1Q8IWV7 1749 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 AK2P54819 239 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 MPHOSPH8Q99549 860 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
PRDM16-207ENST00000512462 PES1O00541 588 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms