RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 ZNF513Q8N8E2 541 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 NAP1L4Q99733 375 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 DDX56Q9NY93 547 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 SLAIN2Q9P270 581 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 TBC1D2BQ9UPU7 963 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 MRPL42Q9Y6G3 142 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 ABCC11Q96J66 1382 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 NWD1Q149M9 1564 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 XRN1Q8IZH2 1706 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 ATP2B1P20020 1258 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 MAP9Q49MG5 647 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 ESCO1Q5FWF5 840 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 ORAI2Q96SN7 254 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 BACH2Q9BYV9 841 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 MKRN1Q9UHC7 482 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 LAMC1P11047 1609 aa6.22□□□□□ -1.41
TRAPPC11-208ENST00000511955 XIRP1Q702N8 1843 aaKnown RBP6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 CEP63Q96MT8 703 aa6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 REPIN1Q9BWE0 567 aaKnown RBP6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 QTRT2Q9H974 415 aaKnown RBP6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 SCINQ9Y6U3 715 aa6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 TRPM1Q7Z4N2 1603 aa6.21□□□□□ -1.41
TRAPPC11-208ENST00000511955 PTCH1Q13635 1447 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 CENPJQ9HC77 1338 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 ST20-MTHFSA0A0A6YYL1 179 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 TCERG1O14776 1098 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 FBXO41Q8TF61 875 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 MKL1Q969V6 931 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 LRRC27Q9C0I9 530 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 NALCNQ8IZF0 1738 aa6.21□□□□□ -1.42
TRAPPC11-208ENST00000511955 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 TTC39BQ5VTQ0 682 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 PCGF5Q86SE9 256 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 CABP2Q9NPB3 220 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 ISY1Q9ULR0 285 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 ADGRL3Q9HAR2 1447 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 FOXO3O43524 673 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 LDHAP00338 332 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSPA1LP34931 641 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 NEXNQ0ZGT2 675 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 MTMR14Q8NCE2 650 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 MYCBPQ99417 103 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 CDC5LQ99459 802 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 RALGAPBQ86X10 1494 aa6.2□□□□□ -1.42
TRAPPC11-208ENST00000511955 TECPR2O15040 1411 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 ATG7O95352 703 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 VDRP11473 427 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 RAD51AP2Q09MP3 1159 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSP90AB3PQ58FF7 597 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 CC2D1AQ6P1N0 951 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 BRINP3Q76B58 766 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 RASEFQ8IZ41 740 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 SGIP1Q9BQI5 828 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 CDK19Q9BWU1 502 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 ZHX3Q9H4I2 956 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 USP47Q96K76 1375 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 WASLO00401 505 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 SERPINB4P48594 390 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 ODR4Q5SWX8 454 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 B4GALNT3Q6L9W6 998 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 PAF1Q8N7H5 531 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 TTF2Q9UNY4 1162 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-208ENST00000511955 EIF3AQ14152 1382 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 FAM135BQ49AJ0 1406 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 ARHGEF28Q8N1W1 1705 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 DYTNA2CJ06 578 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 PPP1R37O75864 691 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 LDHCP07864 332 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 UBE4AQ14139 1066 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 ZRSR2Q15696 482 aaKnown RBP6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 PHLDB3Q6NSJ2 640 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 DRC7Q8IY82 874 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 TMC1Q8TDI8 760 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 TSC1Q92574 1164 aa6.18□□□□□ -1.42
TRAPPC11-208ENST00000511955 PALM3A6NDB9 673 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 FAM200BP0CF97 657 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 DNAJA1P31689 397 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 MTA1Q13330 715 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 L1TD1Q5T7N2 865 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 CAPN10Q9HC96 672 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 KIAA1210Q9ULL0 1709 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 MST1RQ04912 1400 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 ROBO1Q9Y6N7 1651 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 SOWAHDA6NJG2 315 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 C11orf95C9JLR9 678 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 PAK3O75914 559 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 HSPA5P11021 654 aaKnown RBP6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 FECHP22830 423 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 RASSF7Q02833 373 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 FBXO33Q7Z6M2 555 aa6.17□□□□□ -1.42
TRAPPC11-208ENST00000511955 ANKRD23Q86SG2 305 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms