RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 AFDNP55196 1824 aaKnown RBP22.32■■□□□ 1.16
CLDND1-221ENST00000510541 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
CLDND1-221ENST00000510541 SERPINB2P05120 415 aa22.32■■□□□ 1.16
CLDND1-221ENST00000510541 CCDC30Q5VVM6 783 aa22.32■■□□□ 1.16
CLDND1-221ENST00000510541 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
CLDND1-221ENST00000510541 FANCIQ9NVI1 1328 aa22.31■■□□□ 1.16
CLDND1-221ENST00000510541 KIAA1551Q9HCM1 1747 aa22.31■■□□□ 1.16
CLDND1-221ENST00000510541 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-221ENST00000510541 GOLGA2Q08379 1002 aa22.31■■□□□ 1.16
CLDND1-221ENST00000510541 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-221ENST00000510541 NUP98P52948 1817 aa22.31■■□□□ 1.16
CLDND1-221ENST00000510541 HSP90AB3PQ58FF7 597 aa22.3■■□□□ 1.16
CLDND1-221ENST00000510541 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
CLDND1-221ENST00000510541 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
CLDND1-221ENST00000510541 MYL6BP14649 208 aa22.29■■□□□ 1.16
CLDND1-221ENST00000510541 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
CLDND1-221ENST00000510541 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
CLDND1-221ENST00000510541 RIC1Q4ADV7 1423 aa22.29■■□□□ 1.16
CLDND1-221ENST00000510541 E9PSI1 815 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 PROSER3Q2NL68 480 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-221ENST00000510541 PARP10Q53GL7 1025 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 TTLL7Q6ZT98 887 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 ZNF34Q8IZ26 560 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
CLDND1-221ENST00000510541 BRIP1Q9BX63 1249 aa22.28■■□□□ 1.16
CLDND1-221ENST00000510541 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
CLDND1-221ENST00000510541 HLFQ16534 295 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 TPTE2Q6XPS3 522 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 COPS6Q7L5N1 327 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 TRMT2AQ8IZ69 625 aaKnown RBP22.27■■□□□ 1.16
CLDND1-221ENST00000510541 TSPYL6Q8N831 410 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 PLBD2Q8NHP8 589 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 ZNF428Q96B54 188 aa22.27■■□□□ 1.16
CLDND1-221ENST00000510541 VAMP4O75379 141 aa22.26■■□□□ 1.15
CLDND1-221ENST00000510541 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
CLDND1-221ENST00000510541 NYXQ9GZU5 481 aa22.26■■□□□ 1.15
CLDND1-221ENST00000510541 BRCA1P38398 1863 aaKnown RBP22.26■■□□□ 1.15
CLDND1-221ENST00000510541 GRIN3BO60391 1043 aa22.25■■□□□ 1.15
CLDND1-221ENST00000510541 PRR5LQ6MZQ0 368 aa22.25■■□□□ 1.15
CLDND1-221ENST00000510541 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
CLDND1-221ENST00000510541 SPINK5Q9NQ38 1064 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-221ENST00000510541 NIP7Q9Y221 180 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLDND1-221ENST00000510541 KCNA3P22001 575 aa22.24■■□□□ 1.15
CLDND1-221ENST00000510541 PDE6BP35913 854 aa22.24■■□□□ 1.15
CLDND1-221ENST00000510541 ANKRD13DQ6ZTN6 518 aa22.24■■□□□ 1.15
CLDND1-221ENST00000510541 CNBD1Q8NA66 436 aa22.24■■□□□ 1.15
CLDND1-221ENST00000510541 DLEC1Q9Y238 1755 aa22.23■■□□□ 1.15
CLDND1-221ENST00000510541 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-221ENST00000510541 SLFN5Q08AF3 891 aa22.23■■□□□ 1.15
CLDND1-221ENST00000510541 TCIRG1Q13488 830 aa22.23■■□□□ 1.15
CLDND1-221ENST00000510541 ST5P78524 1137 aa22.22■■□□□ 1.15
CLDND1-221ENST00000510541 NBPF5PQ86XG9 351 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-221ENST00000510541 STK31Q9BXU1 1019 aa22.22■■□□□ 1.15
CLDND1-221ENST00000510541 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
CLDND1-221ENST00000510541 PPP1R42Q7Z4L9 355 aa22.21■■□□□ 1.15
CLDND1-221ENST00000510541 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
CLDND1-221ENST00000510541 SALL2Q9Y467 1007 aaPredicted RBP22.21■■□□□ 1.15
CLDND1-221ENST00000510541 ANKRD31Q8N7Z5 1873 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.14
CLDND1-221ENST00000510541 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
CLDND1-221ENST00000510541 ANXA1P04083 346 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
CLDND1-221ENST00000510541 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 KLHL34Q8N239 644 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 PIM2Q9P1W9 311 aa22.2■■□□□ 1.14
CLDND1-221ENST00000510541 GOLGB1Q14789 3259 aaKnown RBP22.19■■□□□ 1.14
CLDND1-221ENST00000510541 DPEP1P16444 411 aa22.19■■□□□ 1.14
CLDND1-221ENST00000510541 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
CLDND1-221ENST00000510541 ISCA1Q9BUE6 129 aa22.19■■□□□ 1.14
CLDND1-221ENST00000510541 UBN2Q6ZU65 1347 aa22.19■■□□□ 1.14
CLDND1-221ENST00000510541 ARFGEF1Q9Y6D6 1849 aa22.19■■□□□ 1.14
CLDND1-221ENST00000510541 GPR162Q16538 588 aa22.18■■□□□ 1.14
CLDND1-221ENST00000510541 N4BP2Q86UW6 1770 aaPredicted RBP22.17■■□□□ 1.14
CLDND1-221ENST00000510541 H0YIN7 160 aa22.17■■□□□ 1.14
CLDND1-221ENST00000510541 NTSR2O95665 410 aa22.17■■□□□ 1.14
CLDND1-221ENST00000510541 CRY2Q49AN0 593 aa22.17■■□□□ 1.14
CLDND1-221ENST00000510541 A0A0G2JLW4 131 aa22.16■■□□□ 1.14
CLDND1-221ENST00000510541 YBX3P16989 372 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLDND1-221ENST00000510541 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
CLDND1-221ENST00000510541 STYK1Q6J9G0 422 aa22.16■■□□□ 1.14
CLDND1-221ENST00000510541 NLRP10Q86W26 655 aa22.16■■□□□ 1.14
CLDND1-221ENST00000510541 SLC4A2P04920 1241 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 SRGNP10124 158 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 SUSD4Q5VX71 490 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 PHAXQ9H814 394 aaKnown RBP22.15■■□□□ 1.14
CLDND1-221ENST00000510541 CHD4Q14839 1912 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
CLDND1-221ENST00000510541 UTRNP46939 3433 aa22.14■■□□□ 1.14
CLDND1-221ENST00000510541 UTP14AQ9BVJ6 771 aaKnown RBP22.14■■□□□ 1.13
CLDND1-221ENST00000510541 BRPF1P55201 1214 aaPredicted RBP22.13■■□□□ 1.13
CLDND1-221ENST00000510541 DALRD3Q5D0E6 543 aaKnown RBP22.13■■□□□ 1.13
CLDND1-221ENST00000510541 RIC3Q7Z5B4 369 aa22.13■■□□□ 1.13
CLDND1-221ENST00000510541 TTLL6Q8N841 843 aa22.13■■□□□ 1.13
CLDND1-221ENST00000510541 CCDC191Q8NCU4 936 aa22.13■■□□□ 1.13
CLDND1-221ENST00000510541 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
CLDND1-221ENST00000510541 METTL22Q9BUU2 404 aaPredicted RBP22.13■■□□□ 1.13
CLDND1-221ENST00000510541 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms