RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ARHGEF28Q8N1W1 1705 aaKnown RBP6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 SBF2Q86WG5 1849 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 WASLO00401 505 aaPredicted RBP6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 DXOO77932 396 aaKnown RBP6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 JUNDP17535 347 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 PTPRNQ16849 979 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 NBPF8Q3BBV2 869 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 NBPF14Q5TI25 921 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 LYPD8Q6UX82 237 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 ZMYND15Q9H091 742 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 POGKQ9P215 609 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 PRR36Q9H6K5 1346 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 POLR3AO14802 1390 aaPredicted RBP6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 BRD4O60885 1362 aaPredicted RBP6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 CPDO75976 1380 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 PEAK1Q9H792 1746 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 SSH2Q76I76 1423 aa6.42□□□□□ -1.38
CALCOCO2-213ENST00000509112 NRKQ7Z2Y5 1582 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 A0A0G2JS52 829 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 AP1G2O75843 785 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 MYT1Q01538 1121 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 MTMR14Q8NCE2 650 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 PNMA1Q8ND90 353 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 PMFBP1Q8TBY8 1022 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 PRDM11Q9NQV5 511 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 KIAA1210Q9ULL0 1709 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 CASZ1Q86V15 1759 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 BCL9O00512 1426 aa6.41□□□□□ -1.38
CALCOCO2-213ENST00000509112 PLSCR1O15162 318 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 RAD21O60216 631 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 TRIM37O94972 964 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 APBA3O96018 575 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 YY1P25490 414 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 COPS2P61201 443 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 KCNC4Q03721 635 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 MMRN1Q13201 1228 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 FAM160A2Q8N612 972 aaPredicted RBP6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 SPON1Q9HCB6 807 aa6.4□□□□□ -1.38
CALCOCO2-213ENST00000509112 ZC3H4Q9UPT8 1303 aaKnown RBP6.4□□□□□ -1.39
CALCOCO2-213ENST00000509112 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
CALCOCO2-213ENST00000509112 CAMTA1Q9Y6Y1 1673 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 WNK3Q9BYP7 1800 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 KCNQ2O43526 872 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 CTDSPL2Q05D32 466 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 PDE3BQ13370 1112 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 NGDNQ8NEJ9 315 aaKnown RBP6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 SYMPKQ92797 1274 aaKnown RBP6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 USP19O94966 1318 aa6.39□□□□□ -1.39
CALCOCO2-213ENST00000509112 CHD4Q14839 1912 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 FAM182BQ5T319 152 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 WWC1Q8IX03 1113 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 TCP11L2Q8N4U5 519 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 GPKOWQ92917 476 aaPredicted RBP eCLIP6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 NUDT16Q96DE0 195 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 SLC6A16Q9GZN6 736 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 SNRKQ9NRH2 765 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 NDUFB9Q9Y6M9 179 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 OVOS2A0A0G2JMS6 1433 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 OVOS2A0A0J9YW53 1432 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 OVOS2Q6IE36 1432 aa6.38□□□□□ -1.39
CALCOCO2-213ENST00000509112 AKAP12Q02952 1782 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 LRRC37A3O60309 1634 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 COL5A2P05997 1499 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 CRB1P82279 1406 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 AATKQ6ZMQ8 1374 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 CCNYL3P0C7X3 344 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 SAFB2Q14151 953 aaKnown RBP eCLIP6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 PPARGC1BQ86YN6 1023 aaKnown RBP6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 ARMC2Q8NEN0 867 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 EVA1BQ9NVM1 165 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
CALCOCO2-213ENST00000509112 COL18A1P39060 1754 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 SLIT3O75094 1523 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 GGCXP38435 758 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 EVA1CP58658 441 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 CDCA7Q9BWT1 371 aaPredicted RBP6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 TRIM34Q9BYJ4 488 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 COG6Q9Y2V7 657 aa6.36□□□□□ -1.39
CALCOCO2-213ENST00000509112 ABCC6O95255 1503 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 MAP3K5Q99683 1374 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 ACEP12821 1306 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 PER1O15534 1290 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 CHRNA2Q15822 529 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 WASHC4Q2M389 1173 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 NLRP13Q86W25 1043 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 TSC1Q92574 1164 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 ZNF516Q92618 1163 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 NUDT12Q9BQG2 462 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 STRN4Q9NRL3 753 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 PPP1R1BQ9UD71 204 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 GPSM3Q9Y4H4 160 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 COL24A1Q17RW2 1714 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 QSER1Q2KHR3 1735 aa6.35□□□□□ -1.39
CALCOCO2-213ENST00000509112 MYOM1P52179 1685 aa6.34□□□□□ -1.39
CALCOCO2-213ENST00000509112 TLL1O43897 1013 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms