RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 MASTLQ96GX5 879 aa17.92■□□□□ 0.46
CCHCR1-227ENST00000508852 APLP1P51693 650 aa17.91■□□□□ 0.46
CCHCR1-227ENST00000508852 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
CCHCR1-227ENST00000508852 CCDC88AQ3V6T2 1871 aa17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 PRAMEF22A3QJZ6 481 aa17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 FSTL1Q12841 308 aa17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 MYBBP1AQ9BQG0 1328 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-227ENST00000508852 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 SRGNP10124 158 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 DPY19L2Q6NUT2 758 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 NMRK2Q9NPI5 230 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.45
CCHCR1-227ENST00000508852 FER1L6Q2WGJ9 1857 aa17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 MIS18AQ9NYP9 233 aa17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-227ENST00000508852 NPR1P16066 1061 aa17.87■□□□□ 0.45
CCHCR1-227ENST00000508852 GTF2E1P29083 439 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-227ENST00000508852 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-227ENST00000508852 RIPK4P57078 832 aa17.87■□□□□ 0.45
CCHCR1-227ENST00000508852 RASSF7Q02833 373 aa17.87■□□□□ 0.45
CCHCR1-227ENST00000508852 TIAM2Q8IVF5 1701 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 CEP350Q5VT06 3117 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 KLRG2A4D1S0 409 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 C21orf2O43822 256 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 ALDH1B1P30837 517 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 TAOK3Q9H2K8 898 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
CCHCR1-227ENST00000508852 NFKBIEO00221 500 aa17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 VEGFAP15692 232 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 NUP98P52948 1817 aa17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 PRPF40BQ6NWY9 871 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 RRAGCQ9HB90 399 aa17.85■□□□□ 0.45
CCHCR1-227ENST00000508852 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
CCHCR1-227ENST00000508852 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
CCHCR1-227ENST00000508852 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCHCR1-227ENST00000508852 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
CCHCR1-227ENST00000508852 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
CCHCR1-227ENST00000508852 TMPOP42166 694 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-227ENST00000508852 ERFEQ4G0M1 354 aa17.83■□□□□ 0.44
CCHCR1-227ENST00000508852 CCDC24Q8N4L8 307 aa17.83■□□□□ 0.44
CCHCR1-227ENST00000508852 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-227ENST00000508852 SLX4Q8IY92 1834 aa17.83■□□□□ 0.44
CCHCR1-227ENST00000508852 GRIPAP1Q4V328 841 aa17.82■□□□□ 0.44
CCHCR1-227ENST00000508852 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
CCHCR1-227ENST00000508852 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
CCHCR1-227ENST00000508852 HLFQ16534 295 aa17.81■□□□□ 0.44
CCHCR1-227ENST00000508852 RUNDC1Q96C34 613 aa17.81■□□□□ 0.44
CCHCR1-227ENST00000508852 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-227ENST00000508852 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
CCHCR1-227ENST00000508852 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
CCHCR1-227ENST00000508852 MYL6BP14649 208 aa17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 PPP1R42Q7Z4L9 355 aa17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
CCHCR1-227ENST00000508852 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-227ENST00000508852 PRELPP51888 382 aa17.78■□□□□ 0.44
CCHCR1-227ENST00000508852 FKBP4Q02790 459 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCHCR1-227ENST00000508852 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
CCHCR1-227ENST00000508852 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
CCHCR1-227ENST00000508852 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
CCHCR1-227ENST00000508852 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
CCHCR1-227ENST00000508852 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
CCHCR1-227ENST00000508852 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
CCHCR1-227ENST00000508852 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
CCHCR1-227ENST00000508852 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
CCHCR1-227ENST00000508852 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
CCHCR1-227ENST00000508852 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
CCHCR1-227ENST00000508852 IQCA1LA6NCM1 817 aa17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 CHL1O00533 1208 aa17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 HOXB7P09629 217 aa17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
CCHCR1-227ENST00000508852 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
CCHCR1-227ENST00000508852 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
CCHCR1-227ENST00000508852 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
CCHCR1-227ENST00000508852 SCN4AP35499 1836 aa17.74■□□□□ 0.43
CCHCR1-227ENST00000508852 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 DNAJC5GQ8N7S2 189 aa17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 PSMD1Q99460 953 aa17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCHCR1-227ENST00000508852 ANKRD36CQ5JPF3 1778 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 GPTP24298 496 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 PDIA6Q15084 440 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 SUSD4Q5VX71 490 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms