RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-221ENST00000507845 NUP98P52948 1817 aa17.29■□□□□ 0.36
UBE2D3-221ENST00000507845 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
UBE2D3-221ENST00000507845 A0A087WZG4 1122 aa17.28■□□□□ 0.36
UBE2D3-221ENST00000507845 PSDA5PKW4 1024 aaPredicted RBP17.28■□□□□ 0.36
UBE2D3-221ENST00000507845 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
UBE2D3-221ENST00000507845 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
UBE2D3-221ENST00000507845 RFC4P35249 363 aa17.27■□□□□ 0.36
UBE2D3-221ENST00000507845 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.36
UBE2D3-221ENST00000507845 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
UBE2D3-221ENST00000507845 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
UBE2D3-221ENST00000507845 XAGE3Q8WTP9 111 aa17.27■□□□□ 0.36
UBE2D3-221ENST00000507845 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.35
UBE2D3-221ENST00000507845 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 COPS6Q7L5N1 327 aa17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 G2E3Q7L622 706 aa17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 COL24A1Q17RW2 1714 aa17.26■□□□□ 0.35
UBE2D3-221ENST00000507845 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
UBE2D3-221ENST00000507845 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
UBE2D3-221ENST00000507845 MRPL50Q8N5N7 158 aaKnown RBP17.25■□□□□ 0.35
UBE2D3-221ENST00000507845 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
UBE2D3-221ENST00000507845 ZPR1O75312 459 aa17.24■□□□□ 0.35
UBE2D3-221ENST00000507845 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-221ENST00000507845 ARXQ96QS3 562 aa17.24■□□□□ 0.35
UBE2D3-221ENST00000507845 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
UBE2D3-221ENST00000507845 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
UBE2D3-221ENST00000507845 FLIIQ13045 1269 aa17.23■□□□□ 0.35
UBE2D3-221ENST00000507845 USPL1Q5W0Q7 1092 aa17.23■□□□□ 0.35
UBE2D3-221ENST00000507845 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
UBE2D3-221ENST00000507845 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
UBE2D3-221ENST00000507845 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
UBE2D3-221ENST00000507845 GYS1P13807 737 aa17.22■□□□□ 0.35
UBE2D3-221ENST00000507845 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-221ENST00000507845 SLC16A10Q8TF71 515 aa17.22■□□□□ 0.35
UBE2D3-221ENST00000507845 ZBTB3Q9H5J0 574 aa17.22■□□□□ 0.35
UBE2D3-221ENST00000507845 RGL2O15211 777 aa17.21■□□□□ 0.35
UBE2D3-221ENST00000507845 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
UBE2D3-221ENST00000507845 ADCY9O60503 1353 aa17.2■□□□□ 0.34
UBE2D3-221ENST00000507845 BCAR3O75815 825 aa17.2■□□□□ 0.34
UBE2D3-221ENST00000507845 FKBP8Q14318 412 aa17.2■□□□□ 0.34
UBE2D3-221ENST00000507845 HLFQ16534 295 aa17.2■□□□□ 0.34
UBE2D3-221ENST00000507845 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
UBE2D3-221ENST00000507845 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 GIGYF2Q6Y7W6 1299 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
UBE2D3-221ENST00000507845 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
UBE2D3-221ENST00000507845 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
UBE2D3-221ENST00000507845 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
UBE2D3-221ENST00000507845 ZNF652Q9Y2D9 606 aa17.18■□□□□ 0.34
UBE2D3-221ENST00000507845 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 PI4KAP2A4QPH2 592 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 PI4KAP1Q8N8J0 262 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 ATP10DQ9P241 1426 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 PTPRCP08575 1304 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
UBE2D3-221ENST00000507845 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
UBE2D3-221ENST00000507845 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
UBE2D3-221ENST00000507845 TM4SF1P30408 202 aa17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 NFIXQ14938 502 aa17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 HSP90AB3PQ58FF7 597 aa17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
UBE2D3-221ENST00000507845 F6X3S4 739 aa17.14■□□□□ 0.33
UBE2D3-221ENST00000507845 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
UBE2D3-221ENST00000507845 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
UBE2D3-221ENST00000507845 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
UBE2D3-221ENST00000507845 MMP10P09238 476 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 GPTP24298 496 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 DDR1Q08345 913 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 MYD88Q99836 296 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 SGIP1Q9BQI5 828 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 UBN2Q6ZU65 1347 aa17.13■□□□□ 0.33
UBE2D3-221ENST00000507845 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
UBE2D3-221ENST00000507845 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
UBE2D3-221ENST00000507845 PTGER2P43116 358 aa17.11■□□□□ 0.33
UBE2D3-221ENST00000507845 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-221ENST00000507845 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms