RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 IFT57Q9NWB7 429 aa29.39■■■□□ 2.3
HMGB2-204ENST00000506267 ZNF652Q9Y2D9 606 aa29.39■■■□□ 2.3
HMGB2-204ENST00000506267 PROSER3Q2NL68 480 aa29.38■■■□□ 2.29
HMGB2-204ENST00000506267 BCS1LQ9Y276 419 aa29.38■■■□□ 2.29
HMGB2-204ENST00000506267 NUP98P52948 1817 aa29.38■■■□□ 2.29
HMGB2-204ENST00000506267 ERVV-1B6SEH8 477 aa29.37■■■□□ 2.29
HMGB2-204ENST00000506267 PIM2Q9P1W9 311 aa29.37■■■□□ 2.29
HMGB2-204ENST00000506267 MAP3K15Q6ZN16 1313 aa29.37■■■□□ 2.29
HMGB2-204ENST00000506267 DLEC1Q9Y238 1755 aa29.36■■■□□ 2.29
HMGB2-204ENST00000506267 ARFGEF1Q9Y6D6 1849 aa29.36■■■□□ 2.29
HMGB2-204ENST00000506267 SENP3-EIF4A1A0A087X0R7 540 aa29.36■■■□□ 2.29
HMGB2-204ENST00000506267 CALD1Q05682 793 aaKnown RBP29.36■■■□□ 2.29
HMGB2-204ENST00000506267 CCDC27Q2M243 656 aa29.36■■■□□ 2.29
HMGB2-204ENST00000506267 CCDC24Q8N4L8 307 aa29.35■■■□□ 2.29
HMGB2-204ENST00000506267 ANXA1P04083 346 aa29.34■■■□□ 2.29
HMGB2-204ENST00000506267 HOXB7P09629 217 aa29.34■■■□□ 2.29
HMGB2-204ENST00000506267 GNAI1P63096 354 aa29.34■■■□□ 2.29
HMGB2-204ENST00000506267 NCBP3Q53F19 620 aaKnown RBP29.34■■■□□ 2.29
HMGB2-204ENST00000506267 BRIP1Q9BX63 1249 aa29.34■■■□□ 2.29
HMGB2-204ENST00000506267 CNBD1Q8NA66 436 aa29.33■■■□□ 2.29
HMGB2-204ENST00000506267 NECTIN2Q92692 538 aa29.33■■■□□ 2.29
HMGB2-204ENST00000506267 NIP7Q9Y221 180 aaKnown RBP eCLIP29.33■■■□□ 2.29
HMGB2-204ENST00000506267 DALRD3Q5D0E6 543 aaKnown RBP29.32■■■□□ 2.28
HMGB2-204ENST00000506267 KIF6Q6ZMV9 814 aa29.32■■■□□ 2.28
HMGB2-204ENST00000506267 WWC1Q8IX03 1113 aa29.32■■■□□ 2.28
HMGB2-204ENST00000506267 ATP10DQ9P241 1426 aa29.31■■■□□ 2.28
HMGB2-204ENST00000506267 DUSP27Q5VZP5 1158 aa29.31■■■□□ 2.28
HMGB2-204ENST00000506267 C2CD5Q86YS7 1000 aa29.31■■■□□ 2.28
HMGB2-204ENST00000506267 ZNF784Q8NCA9 323 aaPredicted RBP29.31■■■□□ 2.28
HMGB2-204ENST00000506267 DDX21Q9NR30 783 aaKnown RBP eCLIP29.31■■■□□ 2.28
HMGB2-204ENST00000506267 NBPF5PQ86XG9 351 aaPredicted RBP29.3■■■□□ 2.28
HMGB2-204ENST00000506267 ZBTB3Q9H5J0 574 aa29.3■■■□□ 2.28
HMGB2-204ENST00000506267 COL11A2P13942 1736 aaPredicted RBP29.3■■■□□ 2.28
HMGB2-204ENST00000506267 H0YIN7 160 aa29.28■■■□□ 2.28
HMGB2-204ENST00000506267 PDE6BP35913 854 aa29.28■■■□□ 2.28
HMGB2-204ENST00000506267 HDGFL1Q5TGJ6 251 aa29.28■■■□□ 2.28
HMGB2-204ENST00000506267 CHPF2Q9P2E5 772 aa29.28■■■□□ 2.28
HMGB2-204ENST00000506267 GIGYF2Q6Y7W6 1299 aaKnown RBP29.27■■■□□ 2.28
HMGB2-204ENST00000506267 ST5P78524 1137 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 TPTE2Q6XPS3 522 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 COPS6Q7L5N1 327 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 ZNF34Q8IZ26 560 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 FAM9BQ8IZU0 186 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 XAGE3Q8WTP9 111 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 PDZRN3Q9UPQ7 1066 aa29.26■■■□□ 2.27
HMGB2-204ENST00000506267 UBN2Q6ZU65 1347 aa29.25■■■□□ 2.27
HMGB2-204ENST00000506267 C8orf58Q8NAV2 365 aa29.25■■■□□ 2.27
HMGB2-204ENST00000506267 ADCY9O60503 1353 aa29.25■■■□□ 2.27
HMGB2-204ENST00000506267 ARHGAP27Q6ZUM4 889 aa29.24■■■□□ 2.27
HMGB2-204ENST00000506267 TTLL6Q8N841 843 aa29.24■■■□□ 2.27
HMGB2-204ENST00000506267 IL16Q14005 1332 aa29.23■■■□□ 2.27
HMGB2-204ENST00000506267 KLRG2A4D1S0 409 aaPredicted RBP29.23■■■□□ 2.27
HMGB2-204ENST00000506267 FAM177BA6PVY3 158 aa29.23■■■□□ 2.27
HMGB2-204ENST00000506267 NPHP1O15259 732 aa29.23■■■□□ 2.27
HMGB2-204ENST00000506267 DBF4Q9UBU7 674 aaPredicted RBP29.23■■■□□ 2.27
HMGB2-204ENST00000506267 GPTP24298 496 aa29.22■■■□□ 2.27
HMGB2-204ENST00000506267 TSR2Q969E8 191 aaKnown RBP29.22■■■□□ 2.27
HMGB2-204ENST00000506267 ELL2O00472 640 aaPredicted RBP29.21■■■□□ 2.27
HMGB2-204ENST00000506267 SRGNP10124 158 aa29.21■■■□□ 2.27
HMGB2-204ENST00000506267 AIMP1Q12904 312 aaKnown RBP29.21■■■□□ 2.27
HMGB2-204ENST00000506267 SUSD4Q5VX71 490 aa29.2■■■□□ 2.26
HMGB2-204ENST00000506267 TSPYL6Q8N831 410 aa29.2■■■□□ 2.26
HMGB2-204ENST00000506267 IBTKQ9P2D0 1353 aaPredicted RBP29.2■■■□□ 2.26
HMGB2-204ENST00000506267 ZNF622Q969S3 477 aaKnown RBP eCLIP29.19■■■□□ 2.262e-44■□□□□ 10.2
HMGB2-204ENST00000506267 SALL2Q9Y467 1007 aaPredicted RBP29.19■■■□□ 2.26
HMGB2-204ENST00000506267 ANKRD36CQ5JPF3 1778 aa29.18■■■□□ 2.26
HMGB2-204ENST00000506267 ABCC12Q96J65 1359 aa29.18■■■□□ 2.26
HMGB2-204ENST00000506267 STYK1Q6J9G0 422 aa29.18■■■□□ 2.26
HMGB2-204ENST00000506267 NYXQ9GZU5 481 aa29.18■■■□□ 2.26
HMGB2-204ENST00000506267 HYPKQ9NX55 129 aa29.18■■■□□ 2.26
HMGB2-204ENST00000506267 NTSR2O95665 410 aa29.17■■■□□ 2.26
HMGB2-204ENST00000506267 NUTM1Q86Y26 1132 aa29.17■■■□□ 2.26
HMGB2-204ENST00000506267 WDR63Q8IWG1 891 aa29.17■■■□□ 2.26
HMGB2-204ENST00000506267 TNRC6CQ9HCJ0 1690 aaKnown RBP29.17■■■□□ 2.26
HMGB2-204ENST00000506267 SLX4Q8IY92 1834 aa29.17■■■□□ 2.26
HMGB2-204ENST00000506267 SBF1O95248 1867 aa29.17■■■□□ 2.26
HMGB2-204ENST00000506267 ERFEQ4G0M1 354 aa29.16■■■□□ 2.26
HMGB2-204ENST00000506267 MASTLQ96GX5 879 aa29.16■■■□□ 2.26
HMGB2-204ENST00000506267 ARFGEF2Q9Y6D5 1785 aa29.16■■■□□ 2.26
HMGB2-204ENST00000506267 PARP10Q53GL7 1025 aa29.15■■■□□ 2.26
HMGB2-204ENST00000506267 RIC1Q4ADV7 1423 aa29.14■■■□□ 2.26
HMGB2-204ENST00000506267 GTF2E1P29083 439 aaPredicted RBP29.14■■■□□ 2.26
HMGB2-204ENST00000506267 TCIRG1Q13488 830 aa29.14■■■□□ 2.26
HMGB2-204ENST00000506267 PLBD2Q8NHP8 589 aa29.14■■■□□ 2.26
HMGB2-204ENST00000506267 CACNA1SQ13698 1873 aa29.13■■■□□ 2.25
HMGB2-204ENST00000506267 HSP90AB3PQ58FF7 597 aa29.13■■■□□ 2.25
HMGB2-204ENST00000506267 ANKRD13DQ6ZTN6 518 aa29.13■■■□□ 2.25
HMGB2-204ENST00000506267 CNKSR1Q969H4 720 aa29.13■■■□□ 2.25
HMGB2-204ENST00000506267 NPR1P16066 1061 aa29.12■■■□□ 2.25
HMGB2-204ENST00000506267 CRY2Q49AN0 593 aa29.12■■■□□ 2.25
HMGB2-204ENST00000506267 PHAXQ9H814 394 aaKnown RBP29.12■■■□□ 2.25
HMGB2-204ENST00000506267 SPINK5Q9NQ38 1064 aaPredicted RBP29.12■■■□□ 2.25
HMGB2-204ENST00000506267 FANCIQ9NVI1 1328 aa29.12■■■□□ 2.25
HMGB2-204ENST00000506267 PRPF40BQ6NWY9 871 aaKnown RBP29.11■■■□□ 2.25
HMGB2-204ENST00000506267 PPP1R42Q7Z4L9 355 aa29.11■■■□□ 2.25
HMGB2-204ENST00000506267 NLRP10Q86W26 655 aa29.11■■■□□ 2.25
HMGB2-204ENST00000506267 PRELPP51888 382 aa29.1■■■□□ 2.25
HMGB2-204ENST00000506267 CCDC30Q5VVM6 783 aa29.1■■■□□ 2.25
HMGB2-204ENST00000506267 C9orf131Q5VYM1 1079 aa29.1■■■□□ 2.25
HMGB2-204ENST00000506267 FER1L6Q2WGJ9 1857 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms