RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 POLD1P28340 1107 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 C4BP0C0L5 1744 aa13.75□□□□□ -0.21
AC012339.1-201ENST00000505564 HEG1Q9ULI3 1381 aa13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 RPS6KA4O75676 772 aa13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 RFC4P35249 363 aa13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 MIS18AQ9NYP9 233 aa13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 ZNF831Q5JPB2 1677 aa13.74□□□□□ -0.21
AC012339.1-201ENST00000505564 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
AC012339.1-201ENST00000505564 CYP19A1P11511 503 aaPredicted RBP13.73□□□□□ -0.21
AC012339.1-201ENST00000505564 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
AC012339.1-201ENST00000505564 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
AC012339.1-201ENST00000505564 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
AC012339.1-201ENST00000505564 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
AC012339.1-201ENST00000505564 KCNQ3O43525 872 aa13.71□□□□□ -0.21
AC012339.1-201ENST00000505564 SYT17Q9BSW7 474 aa13.71□□□□□ -0.21
AC012339.1-201ENST00000505564 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.22
AC012339.1-201ENST00000505564 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 A0A087WZG4 1122 aa13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 ZPR1O75312 459 aa13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 ARXQ96QS3 562 aa13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
AC012339.1-201ENST00000505564 G3V3G9 751 aa13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 GNAI1P63096 354 aa13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 DPY19L2Q6NUT2 758 aa13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
AC012339.1-201ENST00000505564 CHL1O00533 1208 aa13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
AC012339.1-201ENST00000505564 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 SMIM5Q71RC9 77 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 ZBTB1Q9Y2K1 713 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 CICQ96RK0 1608 aaPredicted RBP13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 TJP1Q07157 1748 aa13.67□□□□□ -0.22
AC012339.1-201ENST00000505564 A1BGP04217 495 aa13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 AMIGO3Q86WK7 504 aa13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 SLAIN1Q8ND83 568 aa13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 COL15A1P39059 1388 aa13.66□□□□□ -0.22
AC012339.1-201ENST00000505564 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
AC012339.1-201ENST00000505564 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
AC012339.1-201ENST00000505564 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
AC012339.1-201ENST00000505564 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 NARFQ9UHQ1 456 aa13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 PARP3Q9Y6F1 533 aa13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
AC012339.1-201ENST00000505564 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 GYS1P13807 737 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 USPL1Q5W0Q7 1092 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 IL16Q14005 1332 aa13.63□□□□□ -0.23
AC012339.1-201ENST00000505564 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 MMP10P09238 476 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 HOXB7P09629 217 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 ZNF652Q9Y2D9 606 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 KDM3BQ7LBC6 1761 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 ERBB4Q15303 1308 aa13.62□□□□□ -0.23
AC012339.1-201ENST00000505564 ZNF853P0CG23 659 aa13.61□□□□□ -0.23
AC012339.1-201ENST00000505564 MYL6BP14649 208 aa13.61□□□□□ -0.23
AC012339.1-201ENST00000505564 PIP4K2AP48426 406 aaPredicted RBP13.61□□□□□ -0.23
AC012339.1-201ENST00000505564 HDGFL1Q5TGJ6 251 aa13.61□□□□□ -0.23
AC012339.1-201ENST00000505564 KIF6Q6ZMV9 814 aa13.61□□□□□ -0.23
AC012339.1-201ENST00000505564 MFRPQ9BY79 579 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms