RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 AEBP2Q6ZN18 517 aaPredicted RBP29.22■■■□□ 2.27
AC012339.1-201ENST00000505564 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
AC012339.1-201ENST00000505564 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
AC012339.1-201ENST00000505564 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
AC012339.1-201ENST00000505564 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
AC012339.1-201ENST00000505564 FOXD1Q16676 465 aa23.14■■□□□ 1.29
AC012339.1-201ENST00000505564 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
AC012339.1-201ENST00000505564 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
AC012339.1-201ENST00000505564 ABCC9O60706 1549 aa22.04■■□□□ 1.12
AC012339.1-201ENST00000505564 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
AC012339.1-201ENST00000505564 ADRA2BP18089 450 aa21.92■■□□□ 1.1
AC012339.1-201ENST00000505564 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
AC012339.1-201ENST00000505564 MSH5O43196 834 aa21.55■■□□□ 1.04
AC012339.1-201ENST00000505564 POTEDQ86YR6 584 aa21.21■□□□□ 0.99
AC012339.1-201ENST00000505564 DCAF8L2P0C7V8 631 aa21.16■□□□□ 0.98
AC012339.1-201ENST00000505564 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
AC012339.1-201ENST00000505564 NACADO15069 1562 aa21.01■□□□□ 0.95
AC012339.1-201ENST00000505564 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
AC012339.1-201ENST00000505564 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
AC012339.1-201ENST00000505564 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
AC012339.1-201ENST00000505564 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
AC012339.1-201ENST00000505564 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
AC012339.1-201ENST00000505564 UNC13AQ9UPW8 1703 aa20.42■□□□□ 0.86
AC012339.1-201ENST00000505564 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
AC012339.1-201ENST00000505564 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
AC012339.1-201ENST00000505564 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
AC012339.1-201ENST00000505564 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
AC012339.1-201ENST00000505564 PPP4R3CPQ6ZMV5 832 aa20.02■□□□□ 0.8
AC012339.1-201ENST00000505564 MAPK8IP2Q13387 824 aaPredicted RBP19.98■□□□□ 0.79
AC012339.1-201ENST00000505564 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
AC012339.1-201ENST00000505564 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
AC012339.1-201ENST00000505564 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
AC012339.1-201ENST00000505564 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
AC012339.1-201ENST00000505564 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
AC012339.1-201ENST00000505564 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.71
AC012339.1-201ENST00000505564 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
AC012339.1-201ENST00000505564 NCBP3Q53F19 620 aaKnown RBP19.45■□□□□ 0.7
AC012339.1-201ENST00000505564 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
AC012339.1-201ENST00000505564 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
AC012339.1-201ENST00000505564 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
AC012339.1-201ENST00000505564 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
AC012339.1-201ENST00000505564 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
AC012339.1-201ENST00000505564 HOXD11P31277 338 aaPredicted RBP19.28■□□□□ 0.68
AC012339.1-201ENST00000505564 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
AC012339.1-201ENST00000505564 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
AC012339.1-201ENST00000505564 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
AC012339.1-201ENST00000505564 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
AC012339.1-201ENST00000505564 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
AC012339.1-201ENST00000505564 CUX2O14529 1486 aa19.17■□□□□ 0.66
AC012339.1-201ENST00000505564 WIZO95785 1651 aa19.14■□□□□ 0.66
AC012339.1-201ENST00000505564 KCNA4P22459 653 aa19.11■□□□□ 0.65
AC012339.1-201ENST00000505564 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
AC012339.1-201ENST00000505564 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
AC012339.1-201ENST00000505564 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
AC012339.1-201ENST00000505564 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
AC012339.1-201ENST00000505564 NESP48681 1621 aa18.88■□□□□ 0.61
AC012339.1-201ENST00000505564 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
AC012339.1-201ENST00000505564 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
AC012339.1-201ENST00000505564 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
AC012339.1-201ENST00000505564 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
AC012339.1-201ENST00000505564 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
AC012339.1-201ENST00000505564 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
AC012339.1-201ENST00000505564 CFTRP13569 1480 aa18.71■□□□□ 0.59
AC012339.1-201ENST00000505564 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
AC012339.1-201ENST00000505564 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
AC012339.1-201ENST00000505564 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
AC012339.1-201ENST00000505564 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
AC012339.1-201ENST00000505564 WDR62O43379 1518 aa18.53■□□□□ 0.56
AC012339.1-201ENST00000505564 PRDM2Q13029 1718 aa18.52■□□□□ 0.55
AC012339.1-201ENST00000505564 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
AC012339.1-201ENST00000505564 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
AC012339.1-201ENST00000505564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC012339.1-201ENST00000505564 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
AC012339.1-201ENST00000505564 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
AC012339.1-201ENST00000505564 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
AC012339.1-201ENST00000505564 OSCARQ8IYS5 282 aa18.25■□□□□ 0.51
AC012339.1-201ENST00000505564 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
AC012339.1-201ENST00000505564 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
AC012339.1-201ENST00000505564 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
AC012339.1-201ENST00000505564 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
AC012339.1-201ENST00000505564 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
AC012339.1-201ENST00000505564 CUX1P39880 1505 aa18.15■□□□□ 0.5
AC012339.1-201ENST00000505564 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
AC012339.1-201ENST00000505564 SOGA1O94964 1423 aa18.14■□□□□ 0.49
AC012339.1-201ENST00000505564 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
AC012339.1-201ENST00000505564 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
AC012339.1-201ENST00000505564 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
AC012339.1-201ENST00000505564 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
AC012339.1-201ENST00000505564 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
AC012339.1-201ENST00000505564 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
AC012339.1-201ENST00000505564 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
AC012339.1-201ENST00000505564 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
AC012339.1-201ENST00000505564 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
AC012339.1-201ENST00000505564 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
AC012339.1-201ENST00000505564 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC012339.1-201ENST00000505564 SYNJ1O43426 1573 aa18■□□□□ 0.47
AC012339.1-201ENST00000505564 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
AC012339.1-201ENST00000505564 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
AC012339.1-201ENST00000505564 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
AC012339.1-201ENST00000505564 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms