RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 LARP1Q6PKG0 1096 aaKnown RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
LIN54-204ENST00000505397 TRIM44Q96DX7 344 aaPredicted RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 EPB41L2O43491 1005 aaKnown RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 CABP4P57796 275 aa20.6■□□□□ 0.89
LIN54-204ENST00000505397 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
LIN54-204ENST00000505397 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
LIN54-204ENST00000505397 ANXA1P04083 346 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 MCCP23508 829 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.89
LIN54-204ENST00000505397 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 COL22A1Q8NFW1 1626 aaPredicted RBP20.58■□□□□ 0.89
LIN54-204ENST00000505397 C5P01031 1676 aa20.58■□□□□ 0.88
LIN54-204ENST00000505397 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 INTS4Q96HW7 963 aaKnown RBP20.57■□□□□ 0.88
LIN54-204ENST00000505397 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 PRPF40AO75400 957 aaKnown RBP20.57■□□□□ 0.88
LIN54-204ENST00000505397 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 UBTFL1P0CB47 393 aaPredicted RBP20.56■□□□□ 0.88
LIN54-204ENST00000505397 POLA2Q14181 598 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 BRD1O95696 1058 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 PHLPP1O60346 1717 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 SHANK3Q9BYB0 1731 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 FMNL2Q96PY5 1086 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
LIN54-204ENST00000505397 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
LIN54-204ENST00000505397 NCLP19338 710 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 PROSER3Q2NL68 480 aa20.53■□□□□ 0.88
LIN54-204ENST00000505397 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 ADCY9O60503 1353 aa20.53■□□□□ 0.88
LIN54-204ENST00000505397 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 ANP32BQ92688 251 aaKnown RBP20.52■□□□□ 0.87
LIN54-204ENST00000505397 RBSNQ9H1K0 784 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 IL25Q9H293 177 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
LIN54-204ENST00000505397 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 HSPA4P34932 840 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
LIN54-204ENST00000505397 KSR2Q6VAB6 950 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 MAP3K2Q9Y2U5 619 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 LAMB4A4D0S4 1761 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 PDLIM2Q96JY6 352 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 TMEM63CQ9P1W3 806 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
LIN54-204ENST00000505397 HS1BP3Q53T59 392 aa20.49■□□□□ 0.87
LIN54-204ENST00000505397 ZSCAN30Q86W11 494 aa20.49■□□□□ 0.87
LIN54-204ENST00000505397 SURF6O75683 361 aaKnown RBP20.48■□□□□ 0.87
LIN54-204ENST00000505397 MBD3O95983 291 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
LIN54-204ENST00000505397 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 TOM1O60784 492 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 MYL6BP14649 208 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
LIN54-204ENST00000505397 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
LIN54-204ENST00000505397 PDIA6Q15084 440 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 SGSM2O43147 1006 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 RAD50Q92878 1312 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 PLCH1Q4KWH8 1693 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
LIN54-204ENST00000505397 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 PAPPAQ13219 1627 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 C9orf78Q9NZ63 289 aaPredicted RBP20.45■□□□□ 0.86
LIN54-204ENST00000505397 PIP4K2BP78356 416 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 HDAC5Q9UQL6 1122 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 GLI3P10071 1580 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 LINS1Q8NG48 757 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 MTX1Q13505 466 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 XAGE3Q8WTP9 111 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 SYCE3A1L190 88 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 ADAMTS2O95450 1211 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms