RNA–Protein interactions for RNA: ENST00000504823.5

FAM200B-208, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-208	ENST00000504823	TRAPPC3L	Q5T215	181 aa		13.61	□□□□□ -0.23
FAM200B-208	ENST00000504823	PCNT	O95613	3336 aa		13.61	□□□□□ -0.23
FAM200B-208	ENST00000504823	C4A	P0C0L4	1744 aa		13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	PDE4A	P27815	886 aa		13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	EIF4A2	Q14240	407 aa	Known RBP	13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	SLC4A9	Q96Q91	983 aa		13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	RTCB	Q9Y3I0	505 aa	Known RBP	13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	CNTNAP4	Q9C0A0	1308 aa		13.6	□□□□□ -0.23
FAM200B-208	ENST00000504823	BRCA1	P38398	1863 aa	Known RBP	13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	HSP90AB1	P08238	724 aa	Known RBP	13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	POTEE	Q6S8J3	1075 aa		13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	DCAF5	Q96JK2	942 aa		13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	TIMELESS	Q9UNS1	1208 aa		13.59	□□□□□ -0.23
FAM200B-208	ENST00000504823	TBC1D12	O60347	775 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	TOMM70	O94826	608 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	GYS1	P13807	737 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	PBX2	P40425	430 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	APLP1	P51693	650 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	LSM11	P83369	360 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	OXER1	Q8TDS5	423 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	CCDC87	Q9NVE4	849 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	WWC3	Q9ULE0	1092 aa		13.58	□□□□□ -0.24
FAM200B-208	ENST00000504823	RPS6KA4	O75676	772 aa		13.57	□□□□□ -0.24
FAM200B-208	ENST00000504823	ANKRD13D	Q6ZTN6	518 aa		13.57	□□□□□ -0.24
FAM200B-208	ENST00000504823	ARHGEF1	Q92888	912 aa	Known RBP	13.57	□□□□□ -0.24
FAM200B-208	ENST00000504823	KDM6A	O15550	1401 aa	Predicted RBP	13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823	ARFGEF1	Q9Y6D6	1849 aa		13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823		A0A0G2JLW4	131 aa		13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823	AMOT	Q4VCS5	1084 aa		13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823	RTN4	Q9NQC3	1192 aa	Known RBP	13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823	BCS1L	Q9Y276	419 aa		13.56	□□□□□ -0.24
FAM200B-208	ENST00000504823	DPEP1	P16444	411 aa		13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	KCNA3	P22001	575 aa		13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	RFC4	P35249	363 aa		13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	DNAJC5G	Q8N7S2	189 aa		13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	LARP6	Q9BRS8	491 aa	Known RBP	13.55	□□□□□ -0.24
FAM200B-208	ENST00000504823	DDX27	Q96GQ7	796 aa	Known RBP	13.54	□□□□□ -0.24
FAM200B-208	ENST00000504823	PARP3	Q9Y6F1	533 aa		13.54	□□□□□ -0.24
FAM200B-208	ENST00000504823	MYH14	Q7Z406	1995 aa	Known RBP	13.54	□□□□□ -0.24
FAM200B-208	ENST00000504823	ARHGAP27	Q6ZUM4	889 aa		13.53	□□□□□ -0.24
FAM200B-208	ENST00000504823	RBM46	Q8TBY0	533 aa	Known RBP	13.53	□□□□□ -0.24
FAM200B-208	ENST00000504823	RNF166	Q96A37	237 aa	Predicted RBP	13.53	□□□□□ -0.24
FAM200B-208	ENST00000504823	TJP1	Q07157	1748 aa		13.53	□□□□□ -0.24
FAM200B-208	ENST00000504823	FCHSD2	O94868	740 aa		13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	CABP4	P57796	275 aa		13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	MFSD10	Q14728	455 aa		13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	BBX	Q8WY36	941 aa	Predicted RBP	13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	PIM2	Q9P1W9	311 aa		13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	ADAMTS7	Q9UKP4	1686 aa		13.52	□□□□□ -0.25
FAM200B-208	ENST00000504823	WDR90	Q96KV7	1748 aa		13.51	□□□□□ -0.25
FAM200B-208	ENST00000504823	USP42	Q9H9J4	1324 aa	Known RBP	13.51	□□□□□ -0.25
FAM200B-208	ENST00000504823	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.51	□□□□□ -0.25
FAM200B-208	ENST00000504823	NMRK2	Q9NPI5	230 aa		13.51	□□□□□ -0.25
FAM200B-208	ENST00000504823	MTHFS	P49914	203 aa		13.5	□□□□□ -0.25
FAM200B-208	ENST00000504823	FSTL1	Q12841	308 aa		13.5	□□□□□ -0.25
FAM200B-208	ENST00000504823	CLSPN	Q9HAW4	1339 aa		13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	TNNT2	P45379	298 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	CRKL	P46109	303 aa	Known RBP	13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	DDR1	Q08345	913 aa		13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	DALRD3	Q5D0E6	543 aa	Known RBP	13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	C9orf131	Q5VYM1	1079 aa		13.49	□□□□□ -0.25
FAM200B-208	ENST00000504823	SCN11A	Q9UI33	1791 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	KDM2B	Q8NHM5	1336 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	ARHGAP33	O14559	1287 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	TM4SF1	P30408	202 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	C1orf141	Q5JVX7	400 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	PPP4R3B	Q5MIZ7	849 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	NFATC2IP	Q8NCF5	419 aa		13.48	□□□□□ -0.25
FAM200B-208	ENST00000504823	POLRMT	O00411	1230 aa	Known RBP	13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	PTCD1	O75127	700 aa	Known RBP	13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	TRIM26	Q12899	539 aa	Predicted RBP	13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	INTS5	Q6P9B9	1019 aa	Known RBP	13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	AEBP1	Q8IUX7	1158 aa		13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	JMY	Q8N9B5	988 aa		13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	PANK3	Q9H999	370 aa		13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	SRP68	Q9UHB9	627 aa	Known RBP	13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	MRC1	P22897	1456 aa		13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	NRXN2	Q9P2S2	1712 aa		13.47	□□□□□ -0.25
FAM200B-208	ENST00000504823	KCP	Q6ZWJ8	1503 aa		13.46	□□□□□ -0.25
FAM200B-208	ENST00000504823	KLRG1	Q96E93	195 aa		13.46	□□□□□ -0.25
FAM200B-208	ENST00000504823	SBF1	O95248	1867 aa		13.46	□□□□□ -0.26
FAM200B-208	ENST00000504823	IL13	P35225	146 aa		13.45	□□□□□ -0.26
FAM200B-208	ENST00000504823	AKAP4	Q5JQC9	854 aa		13.45	□□□□□ -0.26
FAM200B-208	ENST00000504823	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.45	□□□□□ -0.26
FAM200B-208	ENST00000504823	SOS1	Q07889	1333 aa	Predicted RBP	13.44	□□□□□ -0.26
FAM200B-208	ENST00000504823	SULT6B1	Q6IMI4	303 aa		13.44	□□□□□ -0.26
FAM200B-208	ENST00000504823	SLC52A2	Q9HAB3	445 aa		13.44	□□□□□ -0.26
FAM200B-208	ENST00000504823	RNF181	Q9P0P0	153 aa		13.44	□□□□□ -0.26
FAM200B-208	ENST00000504823	DLEC1	Q9Y238	1755 aa		13.44	□□□□□ -0.26
FAM200B-208	ENST00000504823	CHRNA5	P30532	468 aa		13.43	□□□□□ -0.26
FAM200B-208	ENST00000504823	PSEN2	P49810	448 aa		13.43	□□□□□ -0.26
FAM200B-208	ENST00000504823	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
FAM200B-208	ENST00000504823	MORC1	Q86VD1	984 aa		13.43	□□□□□ -0.26
FAM200B-208	ENST00000504823	NARF	Q9UHQ1	456 aa		13.43	□□□□□ -0.26
FAM200B-208	ENST00000504823	AFDN	P55196	1824 aa	Known RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms