RNA–Protein interactions for RNA: ENST00000504388.5

SKIV2L2-204, Transcript of Superkiller viralicidic activity 2-like 2, human

TSL 4

Gene SKIV2L2, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L2-204	ENST00000504388	WDR43	Q15061	677 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	SETDB2	Q96T68	719 aa		14.02	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	GPBP1L1	Q9HC44	474 aa	Predicted RBP	14.02	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CLEC11A	Q9Y240	323 aa		14.02	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CAMTA2	O94983	1202 aa		14.01	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	THUMPD2	Q9BTF0	503 aa	Known RBP	14.01	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ZNF652	Q9Y2D9	606 aa		14.01	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	KDM3B	Q7LBC6	1761 aa		14.01	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	SCN7A	Q01118	1682 aa		14.01	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CARMIL3	Q8ND23	1372 aa		14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388		H0YIN7	160 aa		14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	C1QTNF8	P60827	252 aa		14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	LMOD3	Q0VAK6	560 aa		14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ZNF526	Q8TF50	670 aa	Predicted RBP	14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	PDZRN3	Q9UPQ7	1066 aa		14	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	TMPO	P42166	694 aa	Known RBP	13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	EIF4A1	P60842	406 aa	Known RBP	13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CLEC4G	Q6UXB4	293 aa		13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	C2CD5	Q86YS7	1000 aa		13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	LAMB4	A4D0S4	1761 aa		13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	BCOR	Q6W2J9	1755 aa		13.99	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ADCY9	O60503	1353 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	SBF1	O95248	1867 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	NBPF26	B4DH59	902 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	PDE6B	P35913	854 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	NBPF10	Q6P3W6	841 aa	Known RBP	13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	NBPF15	Q8N660	670 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	TTLL6	Q8N841	843 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	BRIP1	Q9BX63	1249 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	TSPYL4	Q9UJ04	414 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	DLEC1	Q9Y238	1755 aa		13.98	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ST5	P78524	1137 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	NEUROD2	Q15784	382 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	PRR5L	Q6MZQ0	368 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CCDC146	Q8IYE0	955 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CNBD1	Q8NA66	436 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CCDC88A	Q3V6T2	1871 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ANKRD31	Q8N7Z5	1873 aa		13.97	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	RGL2	O15211	777 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CCDC24	Q8N4L8	307 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	NGEF	Q8N5V2	710 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	2e-7	■□□□□ 10.7
SKIV2L2-204	ENST00000504388	RUNDC1	Q96C34	613 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	BABAM1	Q9NWV8	329 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	ADAMTS8	Q9UP79	889 aa		13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	RRP7A	Q9Y3A4	280 aa	Known RBP	13.96	□□□□□ -0.17
SKIV2L2-204	ENST00000504388	CEP350	Q5VT06	3117 aa		13.95	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	NUP98	P52948	1817 aa		13.95	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	C9orf131	Q5VYM1	1079 aa		13.95	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.95	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	MYL6B	P14649	208 aa		13.94	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	TPTE2	Q6XPS3	522 aa		13.94	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	CACNA1S	Q13698	1873 aa		13.93	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	SENP3-EIF4A1	A0A087X0R7	540 aa		13.93	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	GTF2E1	P29083	439 aa	Predicted RBP	13.93	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	KIF6	Q6ZMV9	814 aa		13.93	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	RNF181	Q9P0P0	153 aa		13.93	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	ERBB4	Q15303	1308 aa		13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	FAM177B	A6PVY3	158 aa		13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	ERVV-1	B6SEH8	477 aa		13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	EIF2S2	P20042	333 aa	Known RBP	13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	HLF	Q16534	295 aa		13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	LAS1L	Q9Y4W2	734 aa	Known RBP	13.92	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	MAP3K15	Q6ZN16	1313 aa		13.91	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	CNKSR1	Q969H4	720 aa		13.91	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	MASTL	Q96GX5	879 aa		13.91	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	COL11A2	P13942	1736 aa	Predicted RBP	13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	SRGN	P10124	158 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	LMNB1	P20700	586 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	STYK1	Q6J9G0	422 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	TTLL7	Q6ZT98	887 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	NYX	Q9GZU5	481 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	TRIM35	Q9UPQ4	493 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	SLX4	Q8IY92	1834 aa		13.9	□□□□□ -0.18
SKIV2L2-204	ENST00000504388	KDM2B	Q8NHM5	1336 aa		13.9	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	CHL1	O00533	1208 aa		13.89	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	C21orf2	O43822	256 aa		13.89	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	RASSF7	Q02833	373 aa		13.89	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	ZBTB3	Q9H5J0	574 aa		13.89	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	FER1L6	Q2WGJ9	1857 aa		13.89	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	DICER1	Q9UPY3	1922 aa	Known RBP	13.88	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	KIF3C	O14782	793 aa		13.88	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	NPR1	P16066	1061 aa		13.88	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.88	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	ARFGEF2	Q9Y6D5	1785 aa		13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	APAF1	O14727	1248 aa		13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	PRKAR2A	P13861	404 aa	Known RBP	13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	GPT	P24298	496 aa		13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	SOGA3	Q5TF21	947 aa		13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	PRPF40B	Q6NWY9	871 aa	Known RBP	13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	NECTIN2	Q92692	538 aa		13.87	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	KLRG2	A4D1S0	409 aa	Predicted RBP	13.86	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	NFKBIE	O00221	500 aa		13.86	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	CALD1	Q05682	793 aa	Known RBP	13.86	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.86	□□□□□ -0.19
SKIV2L2-204	ENST00000504388	CFAP44	Q96MT7	982 aa		13.86	□□□□□ -0.19

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