RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 ITPRIPQ8IWB1 547 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 MINK1Q8N4C8 1332 aaPredicted RBP7.87□□□□□ -1.15
COPB2-204ENST00000504295 COL14A1Q05707 1796 aaKnown RBP7.87□□□□□ -1.15
COPB2-204ENST00000504295 MEGF6O75095 1541 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 SYCP1Q15431 976 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 ZGPATQ8N5A5 531 aaKnown RBP7.87□□□□□ -1.15
COPB2-204ENST00000504295 USP44Q9H0E7 712 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 NUCB2P80303 420 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 PDIA6Q15084 440 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
COPB2-204ENST00000504295 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 LNPKQ9C0E8 428 aa7.87□□□□□ -1.15
COPB2-204ENST00000504295 ZBTB22O15209 634 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 G2E3Q7L622 706 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 UNC5CLQ8IV45 518 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 PALLDQ8WX93 1383 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 THUMPD2Q9BTF0 503 aaKnown RBP7.86□□□□□ -1.15
COPB2-204ENST00000504295 FBLN1P23142 703 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 MCM2P49736 904 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 CCT4P50991 539 aaKnown RBP7.86□□□□□ -1.15
COPB2-204ENST00000504295 CASP7P55210 303 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 FKBP5Q13451 457 aaPredicted RBP7.86□□□□□ -1.15
COPB2-204ENST00000504295 BEND3Q5T5X7 828 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 HSCBQ8IWL3 235 aa7.86□□□□□ -1.15
COPB2-204ENST00000504295 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
COPB2-204ENST00000504295 PNMA6EA0A0J9YXQ4 647 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 SGSM2O43147 1006 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 EVCP57679 992 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 NECTIN1Q15223 517 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 UTP14CQ5TAP6 766 aaKnown RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 IL17REQ8NFR9 667 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 ARFGEF1Q9Y6D6 1849 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 PSME1Q06323 249 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 TMX3Q96JJ7 454 aa7.85□□□□□ -1.15
COPB2-204ENST00000504295 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 MORC2Q9Y6X9 1032 aaPredicted RBP7.85□□□□□ -1.15
COPB2-204ENST00000504295 ILDR1Q86SU0 546 aaPredicted RBP7.84□□□□□ -1.15
COPB2-204ENST00000504295 PDCL3Q9H2J4 239 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 TTC41PQ6P2S7 1318 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 ZNF609O15014 1411 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 CPDO75976 1380 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 CNGB1Q14028 1251 aaPredicted RBP7.84□□□□□ -1.15
COPB2-204ENST00000504295 COL9A3Q14050 684 aaPredicted RBP7.84□□□□□ -1.15
COPB2-204ENST00000504295 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
COPB2-204ENST00000504295 GBP4Q96PP9 640 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 ZSWIM6Q9HCJ5 1215 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 HYPKQ9NX55 129 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 USP25Q9UHP3 1055 aa7.84□□□□□ -1.15
COPB2-204ENST00000504295 NPHP3Q7Z494 1330 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 ERC2O15083 957 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 HOXC9P31274 260 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 RFX5P48382 616 aaPredicted RBP7.83□□□□□ -1.16
COPB2-204ENST00000504295 UBXN6Q9BZV1 441 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 HMGN5P82970 282 aaKnown RBP7.83□□□□□ -1.16
COPB2-204ENST00000504295 RUFY3Q7L099 469 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 EYA1Q99502 592 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 SRCIN1Q9C0H9 1055 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 LOC285556D6RIA3 1793 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 NRXN2Q9P2S2 1712 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 PLA2G4DQ86XP0 818 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 PIBF1Q8WXW3 757 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 AHDC1Q5TGY3 1603 aaPredicted RBP7.83□□□□□ -1.16
COPB2-204ENST00000504295 CCDC88AQ3V6T2 1871 aa7.83□□□□□ -1.16
COPB2-204ENST00000504295 RBM33Q96EV2 1170 aaKnown RBP7.82□□□□□ -1.16
COPB2-204ENST00000504295 C1orf115Q9H7X2 142 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 CDC25BP30305 580 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 MYRIPQ8NFW9 859 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 LRRC59Q96AG4 307 aaKnown RBP7.82□□□□□ -1.16
COPB2-204ENST00000504295 SNX14Q9Y5W7 946 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 MAP3K15Q6ZN16 1313 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 FAM237AA0A1B0GTK4 181 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 EIF4A1P60842 406 aaKnown RBP7.82□□□□□ -1.16
COPB2-204ENST00000504295 SAFB2Q14151 953 aaKnown RBP eCLIP7.82□□□□□ -1.16
COPB2-204ENST00000504295 RABL6Q3YEC7 729 aaPredicted RBP7.82□□□□□ -1.16
COPB2-204ENST00000504295 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 BRINP3Q76B58 766 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 PHF8Q9UPP1 1060 aa7.82□□□□□ -1.16
COPB2-204ENST00000504295 DYNC1I1O14576 645 aa7.81□□□□□ -1.16
COPB2-204ENST00000504295 UPF2Q9HAU5 1272 aaKnown RBP7.81□□□□□ -1.16
COPB2-204ENST00000504295 FOXP2O15409 715 aa7.81□□□□□ -1.16
COPB2-204ENST00000504295 RAB11FIP3O75154 756 aa7.81□□□□□ -1.16
COPB2-204ENST00000504295 SRPK2P78362 688 aaKnown RBP7.81□□□□□ -1.16
COPB2-204ENST00000504295 PSME4Q14997 1843 aa7.81□□□□□ -1.16
COPB2-204ENST00000504295 SIPA1L1O43166 1804 aa7.81□□□□□ -1.16
COPB2-204ENST00000504295 RIC1Q4ADV7 1423 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 ZSCAN20P17040 1043 aaPredicted RBP7.8□□□□□ -1.16
COPB2-204ENST00000504295 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 SARM1Q6SZW1 724 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 NAV1Q8NEY1 1877 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 HSPA1LP34931 641 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 NASPP49321 788 aaPredicted RBP7.8□□□□□ -1.16
COPB2-204ENST00000504295 MTMR6Q9Y217 621 aa7.8□□□□□ -1.16
COPB2-204ENST00000504295 ANKRD45Q5TZF3 282 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms