RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 HYAL3O43820 417 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 ELNP15502 786 aa5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 NEUROD1Q13562 356 aa5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 TSGA10IPQ3SY00 556 aa5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 SLC51AQ86UW1 340 aa5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 LENG1Q96BZ8 264 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P35-201ENST00000503360 TMEM229AB2RXF0 380 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 MBTPS1Q14703 1052 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 C20orf204Q6ZNR8 217 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 TXNRD3Q86VQ6 643 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 EFCC1Q9HA90 598 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 PRM3Q9NNZ6 103 aa5.52□□□□□ -1.53
HMGB1P35-201ENST00000503360 EML1O00423 815 aa5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 BACH1O14867 736 aa5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 STAU1O95793 577 aaKnown RBP5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 KCNQ4P56696 695 aa5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 OXLD1Q5BKU9 147 aa5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 BICDL1Q6ZP65 573 aa5.51□□□□□ -1.53
HMGB1P35-201ENST00000503360 ALBP02768 609 aa5.5□□□□□ -1.53
HMGB1P35-201ENST00000503360 TEAD4Q15561 434 aa5.5□□□□□ -1.53
HMGB1P35-201ENST00000503360 ILDR2Q71H61 639 aa5.5□□□□□ -1.53
HMGB1P35-201ENST00000503360 C7orf43Q8WVR3 580 aa5.5□□□□□ -1.53
HMGB1P35-201ENST00000503360 SSBP4Q9BWG4 385 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P35-201ENST00000503360 LZTS3O60299 673 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 SELPP16109 830 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 SOX11P35716 441 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 ADH7P40394 386 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 GRIK4Q16099 956 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 CABP1Q9NZU7 370 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 SCHIP1Q9P0W5 487 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 RNF112Q9ULX5 631 aa5.49□□□□□ -1.53
HMGB1P35-201ENST00000503360 COL17A1Q9UMD9 1497 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 LILRB5O75023 590 aa5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 RAC1P63000 192 aa5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 PLPP7Q8NBV4 271 aa5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 PCDHGA11Q9Y5H2 935 aa5.48□□□□□ -1.53
HMGB1P35-201ENST00000503360 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 TRAPPC3LQ5T215 181 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 C1orf53Q5VUE5 145 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 POTEAQ6S8J7 498 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 L3MBTL2Q969R5 705 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 SNRKQ9NRH2 765 aa5.47□□□□□ -1.53
HMGB1P35-201ENST00000503360 A0A0A0MRY4 1105 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 NOS2P35228 1153 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 TXKP42681 527 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 HIRAP54198 1017 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 IRF5Q13568 498 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 WASHC4Q2M389 1173 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 DTWD1Q8N5C7 304 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 ZDHHC1Q8WTX9 485 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 FMNL2Q96PY5 1086 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 SLC30A3Q99726 388 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 NEUROD4Q9HD90 331 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 ANKIB1Q9P2G1 1089 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 SERTAD1Q9UHV2 236 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 USP3Q9Y6I4 520 aa5.46□□□□□ -1.54
HMGB1P35-201ENST00000503360 TXLNAP40222 546 aa5.45□□□□□ -1.54
HMGB1P35-201ENST00000503360 EPHA4P54764 986 aa5.45□□□□□ -1.54
HMGB1P35-201ENST00000503360 PAX4O43316 350 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 SFSWAPQ12872 951 aaKnown RBP5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 LRRC69Q6ZNQ3 347 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 C8orf86Q6ZUL3 223 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 NFATC2IPQ8NCF5 419 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 TP53INP1Q96A56 240 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 TBC1D2BQ9UPU7 963 aa5.44□□□□□ -1.54
HMGB1P35-201ENST00000503360 FMR1NBQ8N0W7 255 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P35-201ENST00000503360 KCNH4Q9UQ05 1017 aa5.43□□□□□ -1.54
HMGB1P35-201ENST00000503360 YBX3P16989 372 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P35-201ENST00000503360 HIF1AQ16665 826 aa5.42□□□□□ -1.54
HMGB1P35-201ENST00000503360 BRD7Q9NPI1 651 aa5.42□□□□□ -1.54
HMGB1P35-201ENST00000503360 ZNF358Q9NW07 568 aa5.42□□□□□ -1.54
HMGB1P35-201ENST00000503360 NOD1Q9Y239 953 aa5.42□□□□□ -1.54
HMGB1P35-201ENST00000503360 SERTM1A2A2V5 107 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 TYRO3Q06418 890 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 PCSK7Q16549 785 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 EML3Q32P44 896 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 IL27Q8NEV9 243 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 RHPN1Q8TCX5 695 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 PARP3Q9Y6F1 533 aa5.41□□□□□ -1.54
HMGB1P35-201ENST00000503360 SEMA3FQ13275 785 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 FBXO11Q86XK2 927 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 SLC9A9Q8IVB4 645 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 TTC9Q92623 222 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 C11orf16Q9NQ32 467 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 SLC6A14Q9UN76 642 aa5.4□□□□□ -1.54
HMGB1P35-201ENST00000503360 M0R2N6 131 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 PSMA6P60900 246 aaKnown RBP5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 GTF2IP78347 998 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 SHISA2Q6UWI4 295 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 WFDC12Q8WWY7 111 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 CEP63Q96MT8 703 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 JPH1Q9HDC5 661 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 FRRS1LQ9P0K9 344 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 USP21Q9UK80 565 aa5.39□□□□□ -1.55
HMGB1P35-201ENST00000503360 ZNF232Q9UNY5 417 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms