RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 PRAMEF22A3QJZ6 481 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 CAPN2P17655 700 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 EIF4A1P60842 406 aaKnown RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 TEFQ10587 303 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 ZNF530Q6P9A1 599 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 NOL8Q76FK4 1167 aaKnown RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 PPP1R42Q7Z4L9 355 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 ANO2Q9NQ90 1003 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 PALD1Q9ULE6 856 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 CEMIPQ8WUJ3 1361 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 IBTKQ9P2D0 1353 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 BTBD11A6QL63 1104 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 SRGAP3O43295 1099 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 SURF6O75683 361 aaKnown RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 GCP02774 474 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 NASPP49321 788 aaPredicted RBP6.23□□□□□ -1.41
CLDND1-208ENST00000503004 NEK4P51957 841 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 SRCIN1Q9C0H9 1055 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 AXIN2Q9Y2T1 843 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 LRRC37A3O60309 1634 aa6.23□□□□□ -1.41
CLDND1-208ENST00000503004 ST18O60284 1047 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 ZNF500O60304 480 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 BAG4O95429 457 aaKnown RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 CCDC173Q0VFZ6 552 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 NKX1-1Q15270 411 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 SASS6Q6UVJ0 657 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 ISY1Q9ULR0 285 aaKnown RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 FAM208AQ9UK61 1670 aaKnown RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 LTN1O94822 1766 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 PATL2C9JE40 543 aaKnown RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 GTPBP6O43824 516 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 APPP05067 770 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 PROSER3Q2NL68 480 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 MPNDQ8N594 471 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
CLDND1-208ENST00000503004 UPF3BQ9BZI7 483 aaKnown RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 SOS1Q07889 1333 aaPredicted RBP6.22□□□□□ -1.41
CLDND1-208ENST00000503004 CHMLP26374 656 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 MCTP1Q6DN14 999 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 KCNH5Q8NCM2 988 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 SSH3Q8TE77 659 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 DNAAF4Q8WXU2 420 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 TRIM34Q9BYJ4 488 aa6.21□□□□□ -1.41
CLDND1-208ENST00000503004 NFAT5O94916 1531 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 PXDNQ92626 1479 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ZC3H6P61129 1189 aaKnown RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 AKAP4Q5JQC9 854 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 BEND3Q5T5X7 828 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 TMCO4Q5TGY1 634 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 FAM43BQ6ZT52 329 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ARHGEF25Q86VW2 580 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ZNF622Q969S3 477 aaKnown RBP eCLIP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 BABAM1Q9NWV8 329 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 DDX49Q9Y6V7 483 aaKnown RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 GRIPAP1Q4V328 841 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ZNF771Q7L3S4 317 aaPredicted RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 RHPN1Q8TCX5 695 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.42
CLDND1-208ENST00000503004 RGPD2P0DJD1 1756 aa6.21□□□□□ -1.42
CLDND1-208ENST00000503004 ADGRL3Q9HAR2 1447 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 ADCY9O60503 1353 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 GOLGA6L22H0YM25 854 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 PLEKHO1Q53GL0 409 aaPredicted RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 C1orf141Q5JVX7 400 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 TMX3Q96JJ7 454 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 YY1AP1Q9H869 796 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 ZDHHC9Q9Y397 364 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 LOC102724159A0A0B4J2E5 919 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 TULP2O00295 520 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 RNMTO43148 476 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 CYP2E1P05181 493 aaPredicted RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 AIMP1Q12904 312 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 SLC39A6Q13433 755 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 PWP2Q15269 919 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 PI4K2BQ8TCG2 481 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 GEMIN8Q9NWZ8 242 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 STAP2Q9UGK3 403 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 PA2G4Q9UQ80 394 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 MAP3K2Q9Y2U5 619 aa6.2□□□□□ -1.42
CLDND1-208ENST00000503004 CHD2O14647 1828 aaKnown RBP6.2□□□□□ -1.42
CLDND1-208ENST00000503004 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 NUCB2P80303 420 aa6.19□□□□□ -1.42
CLDND1-208ENST00000503004 MKRN3Q13064 507 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 POLA2Q14181 598 aa6.19□□□□□ -1.42
CLDND1-208ENST00000503004 FOXD4L6Q3SYB3 417 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 FOXD4L3Q6VB84 417 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 DBF4Q9UBU7 674 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 NOL7Q9UMY1 257 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 DTNBO60941 627 aa6.19□□□□□ -1.42
CLDND1-208ENST00000503004 PRPF40AO75400 957 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 OS9Q13438 667 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 SKOR2Q2VWA4 1001 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 CAVIN1Q6NZI2 390 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 CWC27Q6UX04 472 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 KIF1BPQ96EK5 621 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms