RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
HDAC6-236ENST00000498808 C7orf43Q8WVR3 580 aa21.22■□□□□ 0.99
HDAC6-236ENST00000498808 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
HDAC6-236ENST00000498808 SETDB2Q96T68 719 aa21.22■□□□□ 0.99
HDAC6-236ENST00000498808 KNSTRNQ9Y448 316 aa21.22■□□□□ 0.99
HDAC6-236ENST00000498808 SIPA1L3O60292 1781 aaPredicted RBP21.22■□□□□ 0.99
HDAC6-236ENST00000498808 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.992e-9■■■■■ 73
HDAC6-236ENST00000498808 ST5P78524 1137 aa21.21■□□□□ 0.99
HDAC6-236ENST00000498808 AMER1Q5JTC6 1135 aaPredicted RBP21.21■□□□□ 0.99
HDAC6-236ENST00000498808 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
HDAC6-236ENST00000498808 ZNF541Q9H0D2 1346 aa21.21■□□□□ 0.99
HDAC6-236ENST00000498808 NPHP1O15259 732 aa21.2■□□□□ 0.98
HDAC6-236ENST00000498808 A1BGP04217 495 aa21.2■□□□□ 0.98
HDAC6-236ENST00000498808 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
HDAC6-236ENST00000498808 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.98
HDAC6-236ENST00000498808 IL17REQ8NFR9 667 aa21.19■□□□□ 0.98
HDAC6-236ENST00000498808 RASSF10A6NK89 507 aa21.18■□□□□ 0.98
HDAC6-236ENST00000498808 HSPA8P11142 646 aaKnown RBP21.18■□□□□ 0.98
HDAC6-236ENST00000498808 CCDC93Q567U6 631 aa21.18■□□□□ 0.98
HDAC6-236ENST00000498808 ABHD8Q96I13 439 aa21.18■□□□□ 0.98
HDAC6-236ENST00000498808 HACL1Q9UJ83 578 aa21.18■□□□□ 0.98
HDAC6-236ENST00000498808 EPHX2P34913 555 aa21.17■□□□□ 0.98
HDAC6-236ENST00000498808 TEFQ10587 303 aa21.17■□□□□ 0.98
HDAC6-236ENST00000498808 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-236ENST00000498808 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
HDAC6-236ENST00000498808 FKBP4Q02790 459 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC6-236ENST00000498808 FAM161AQ3B820 660 aa21.16■□□□□ 0.98
HDAC6-236ENST00000498808 OLFM4Q6UX06 510 aa21.16■□□□□ 0.98
HDAC6-236ENST00000498808 DZIP3Q86Y13 1208 aaKnown RBP21.16■□□□□ 0.98
HDAC6-236ENST00000498808 CLEC11AQ9Y240 323 aa21.16■□□□□ 0.98
HDAC6-236ENST00000498808 DEFB115Q30KQ5 88 aa21.15■□□□□ 0.98
HDAC6-236ENST00000498808 MAP1SQ66K74 1059 aaPredicted RBP21.15■□□□□ 0.98
HDAC6-236ENST00000498808 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
HDAC6-236ENST00000498808 RNF123Q5XPI4 1314 aa21.14■□□□□ 0.97
HDAC6-236ENST00000498808 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
HDAC6-236ENST00000498808 WDR33Q9C0J8 1336 aaKnown RBP21.13■□□□□ 0.97
HDAC6-236ENST00000498808 KLRG2A4D1S0 409 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-236ENST00000498808 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
HDAC6-236ENST00000498808 KCNQ3O43525 872 aa21.13■□□□□ 0.97
HDAC6-236ENST00000498808 NPR1P16066 1061 aa21.13■□□□□ 0.97
HDAC6-236ENST00000498808 PIP4K2AP48426 406 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-236ENST00000498808 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
HDAC6-236ENST00000498808 NBPF5PQ86XG9 351 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-236ENST00000498808 PNMA8AQ86V59 439 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-236ENST00000498808 THSD7BQ9C0I4 1608 aa21.11■□□□□ 0.97
HDAC6-236ENST00000498808 FZD9O00144 591 aa21.11■□□□□ 0.97
HDAC6-236ENST00000498808 MAP2K1Q02750 393 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-236ENST00000498808 USP16Q9Y5T5 823 aa21.11■□□□□ 0.97
HDAC6-236ENST00000498808 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-236ENST00000498808 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
HDAC6-236ENST00000498808 CLEC4GQ6UXB4 293 aa21.1■□□□□ 0.97
HDAC6-236ENST00000498808 GAS2L2Q8NHY3 880 aa21.1■□□□□ 0.97
HDAC6-236ENST00000498808 SNED1Q8TER0 1413 aa21.1■□□□□ 0.97
HDAC6-236ENST00000498808 IARSP41252 1262 aaKnown RBP21.09■□□□□ 0.97
HDAC6-236ENST00000498808 RTKN2Q8IZC4 609 aa21.09■□□□□ 0.97
HDAC6-236ENST00000498808 ABT1Q9ULW3 272 aaKnown RBP21.09■□□□□ 0.97
HDAC6-236ENST00000498808 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
HDAC6-236ENST00000498808 PRAMEF22A3QJZ6 481 aa21.08■□□□□ 0.97
HDAC6-236ENST00000498808 SYNE4Q8N205 404 aa21.08■□□□□ 0.97
HDAC6-236ENST00000498808 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
HDAC6-236ENST00000498808 GPC2Q8N158 579 aa21.07■□□□□ 0.96
HDAC6-236ENST00000498808 COL4A5P29400 1685 aa21.07■□□□□ 0.96
HDAC6-236ENST00000498808 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
HDAC6-236ENST00000498808 FMR1Q06787 632 aaKnown RBP eCLIP21.06■□□□□ 0.962e-6■■■■□ 22.5
HDAC6-236ENST00000498808 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
HDAC6-236ENST00000498808 CLSPNQ9HAW4 1339 aa21.05■□□□□ 0.96
HDAC6-236ENST00000498808 U2SURPO15042 1029 aaKnown RBP21.05■□□□□ 0.96
HDAC6-236ENST00000498808 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
HDAC6-236ENST00000498808 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
HDAC6-236ENST00000498808 FAM177BA6PVY3 158 aa21.04■□□□□ 0.96
HDAC6-236ENST00000498808 PER1O15534 1290 aaPredicted RBP21.04■□□□□ 0.96
HDAC6-236ENST00000498808 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
HDAC6-236ENST00000498808 CAPNS2Q96L46 248 aa21.04■□□□□ 0.96
HDAC6-236ENST00000498808 CCDC85CA6NKD9 419 aa21.03■□□□□ 0.96
HDAC6-236ENST00000498808 ALDH1B1P30837 517 aa21.03■□□□□ 0.96
HDAC6-236ENST00000498808 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-236ENST00000498808 PSMD1Q99460 953 aa21.03■□□□□ 0.96
HDAC6-236ENST00000498808 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 RGS19P49795 217 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-236ENST00000498808 CYP4F22Q6NT55 531 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
HDAC6-236ENST00000498808 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 JDP2Q8WYK2 163 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 PHACTR3Q96KR7 559 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 GJA3Q9Y6H8 435 aa21.02■□□□□ 0.96
HDAC6-236ENST00000498808 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.95
HDAC6-236ENST00000498808 TRPM7Q96QT4 1865 aa21.01■□□□□ 0.95
HDAC6-236ENST00000498808 RGL2O15211 777 aa21.01■□□□□ 0.95
HDAC6-236ENST00000498808 SCNN1DP51172 638 aa21.01■□□□□ 0.95
HDAC6-236ENST00000498808 PAXIP1Q6ZW49 1069 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-236ENST00000498808 ABCC12Q96J65 1359 aa21■□□□□ 0.95
HDAC6-236ENST00000498808 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
HDAC6-236ENST00000498808 EPS15P42566 896 aa21■□□□□ 0.95
HDAC6-236ENST00000498808 ECE1P42892 770 aa21■□□□□ 0.95
HDAC6-236ENST00000498808 EIF6P56537 245 aaKnown RBP21■□□□□ 0.95
HDAC6-236ENST00000498808 GRM1Q13255 1194 aa21■□□□□ 0.95
HDAC6-236ENST00000498808 HLFQ16534 295 aa21■□□□□ 0.95
HDAC6-236ENST00000498808 GPR101Q96P66 508 aaPredicted RBP21■□□□□ 0.95
HDAC6-236ENST00000498808 TRAF5O00463 557 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms