RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 LAMC1P11047 1609 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 ST5P78524 1137 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 LRRN4CLQ8ND94 238 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 MICAL1Q8TDZ2 1067 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 NRXN1Q9ULB1 1477 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 ADCY5O95622 1261 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 GTF2A1P52655 376 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 ILDR2Q71H61 639 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 FEZ1Q99689 392 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 ERBB3P21860 1342 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 K7ELQ4 463 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 MAP4K4O95819 1239 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 CYP2E1P05181 493 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 LRMPQ12912 555 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 RTF1Q92541 710 aaKnown RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 SNX21Q969T3 373 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 C16orf45Q96MC5 204 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 MCM10Q7L590 875 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZCCHC17Q9NP64 241 aaKnown RBP6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 TMEM131LA2VDJ0 1609 aa6.93□□□□□ -1.3
SOX2-OT-218ENST00000498731 MSH6P52701 1360 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 KAT6BQ8WYB5 2073 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 CCDC66A2RUB6 948 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 TNNT3P45378 269 aaPredicted RBP6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 POLA2Q14181 598 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 FBXO38Q6PIJ6 1188 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 EGFL6Q8IUX8 553 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 KIAA1524Q8TCG1 905 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 TBX22Q9Y458 520 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 MYO3AQ8NEV4 1616 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 CYP2C19P33261 490 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 ATG3Q9NT62 314 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 RPS6KL1Q9Y6S9 549 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZFYVE9O95405 1425 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 TCHHQ07283 1943 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 CLGNO14967 610 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 RARSP54136 660 aaKnown RBP6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 CLEC17AQ6ZS10 378 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 NME8Q8N427 588 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 SYTL4Q96C24 671 aaPredicted RBP6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 ORAI2Q96SN7 254 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 YY1AP1Q9H869 796 aa6.92□□□□□ -1.3
SOX2-OT-218ENST00000498731 FCHSD2O94868 740 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 PACS2Q86VP3 889 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 WDR63Q8IWG1 891 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 PHF8Q9UPP1 1060 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZC3H4Q9UPT8 1303 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 STRCQ7RTU9 1775 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 SETBP1Q9Y6X0 1596 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 NKTRP30414 1462 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 HCLS1P14317 486 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 FOXD4Q12950 439 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 SSH1Q8WYL5 1049 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 FAM53CQ9NYF3 392 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 KLHL42Q9P2K6 505 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 NOB1Q9ULX3 412 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 REREQ9P2R6 1566 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 NSD2O96028 1365 aa6.91□□□□□ -1.3
SOX2-OT-218ENST00000498731 TESPA1A2RU30 521 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 TPD52L2O43399 206 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 BMS1Q14692 1282 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 KRT24Q2M2I5 525 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 SPTY2D1Q68D10 685 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 C19orf44Q9H6X5 657 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 NRBP1Q9UHY1 535 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 MYO1CO00159 1063 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 FOXR1Q6PIV2 292 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 SLC4A10Q6U841 1118 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 TRIM35Q9UPQ4 493 aa6.9□□□□□ -1.3
SOX2-OT-218ENST00000498731 KIAA1210Q9ULL0 1709 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 NINLQ9Y2I6 1382 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 ANKRD62A6NC57 917 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 USP27XA6NNY8 438 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 KRT222Q8N1A0 295 aa6.9□□□□□ -1.31
SOX2-OT-218ENST00000498731 POLR3GO15318 223 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 ELF2Q15723 593 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 ICE2Q659A1 982 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 KRBA2Q6ZNG9 492 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 TSPYL6Q8N831 410 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 KRI1Q8N9T8 703 aaKnown RBP6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 SMARCE1Q969G3 411 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms