RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 COL18A1P39060 1754 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 HTATSF1O43719 755 aaKnown RBP9.92□□□□□ -0.82
CDC42-205ENST00000498236 SH3D19Q5HYK7 790 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 WNT2BQ93097 391 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 IFT57Q9NWB7 429 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
CDC42-205ENST00000498236 FANCIQ9NVI1 1328 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
CDC42-205ENST00000498236 ZNF853P0CG23 659 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 NBPF6Q5VWK0 638 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 NBPF4Q96M43 638 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
CDC42-205ENST00000498236 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.82
CDC42-205ENST00000498236 DLG5Q8TDM6 1919 aa9.9□□□□□ -0.82
CDC42-205ENST00000498236 GNAI1P63096 354 aa9.9□□□□□ -0.82
CDC42-205ENST00000498236 TATDN2Q93075 761 aa9.9□□□□□ -0.82
CDC42-205ENST00000498236 NBPF3Q9H094 633 aa9.9□□□□□ -0.82
CDC42-205ENST00000498236 FAM208AQ9UK61 1670 aaKnown RBP9.9□□□□□ -0.83
CDC42-205ENST00000498236 DNAJB2P25686 324 aa9.89□□□□□ -0.83
CDC42-205ENST00000498236 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
CDC42-205ENST00000498236 MTHFSDQ2M296 383 aaKnown RBP9.89□□□□□ -0.83
CDC42-205ENST00000498236 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.89□□□□□ -0.83
CDC42-205ENST00000498236 LRRC59Q96AG4 307 aaKnown RBP9.89□□□□□ -0.83
CDC42-205ENST00000498236 ZNF428Q96B54 188 aa9.89□□□□□ -0.83
CDC42-205ENST00000498236 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
CDC42-205ENST00000498236 ABCA3Q99758 1704 aa9.89□□□□□ -0.83
CDC42-205ENST00000498236 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
CDC42-205ENST00000498236 SKIV2LQ15477 1246 aaKnown RBP9.88□□□□□ -0.83
CDC42-205ENST00000498236 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
CDC42-205ENST00000498236 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
CDC42-205ENST00000498236 COL22A1Q8NFW1 1626 aaPredicted RBP9.88□□□□□ -0.83
CDC42-205ENST00000498236 CRB1P82279 1406 aa9.88□□□□□ -0.83
CDC42-205ENST00000498236 LRRC37A3O60309 1634 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 C3orf80F5H4A9 247 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 TOM1O60784 492 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
CDC42-205ENST00000498236 AMOTQ4VCS5 1084 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 TSR2Q969E8 191 aaKnown RBP9.87□□□□□ -0.83
CDC42-205ENST00000498236 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
CDC42-205ENST00000498236 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
CDC42-205ENST00000498236 ZBTB7CA1YPR0 619 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 FAM83GA6ND36 823 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 CHL1O00533 1208 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 IRX6P78412 446 aaPredicted RBP9.86□□□□□ -0.83
CDC42-205ENST00000498236 EXOSC9Q06265 439 aaKnown RBP9.86□□□□□ -0.83
CDC42-205ENST00000498236 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
CDC42-205ENST00000498236 RTF1Q92541 710 aaKnown RBP9.86□□□□□ -0.83
CDC42-205ENST00000498236 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
CDC42-205ENST00000498236 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 A0A0G2JS52 829 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 USHBP1Q8N6Y0 703 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
CDC42-205ENST00000498236 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 PRDM11Q9NQV5 511 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 CEMIPQ8WUJ3 1361 aa9.85□□□□□ -0.83
CDC42-205ENST00000498236 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
CDC42-205ENST00000498236 SMAPO00193 183 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 BCAR3O75815 825 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 DCTN1Q14203 1278 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 MCM10Q7L590 875 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
CDC42-205ENST00000498236 COL16A1Q07092 1604 aaPredicted RBP9.84□□□□□ -0.83
CDC42-205ENST00000498236 WDR17Q8IZU2 1322 aa9.83□□□□□ -0.84
CDC42-205ENST00000498236 FLIIQ13045 1269 aa9.83□□□□□ -0.84
CDC42-205ENST00000498236 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
CDC42-205ENST00000498236 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
CDC42-205ENST00000498236 IL17REQ8NFR9 667 aa9.83□□□□□ -0.84
CDC42-205ENST00000498236 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
CDC42-205ENST00000498236 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 PLIN1O60240 522 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 VAMP4O75379 141 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 CD46P15529 392 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 POLR3EQ9NVU0 708 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 NLRP2Q9NX02 1062 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
CDC42-205ENST00000498236 ADAMTS7Q9UKP4 1686 aa9.82□□□□□ -0.84
CDC42-205ENST00000498236 COL14A1Q05707 1796 aaKnown RBP9.81□□□□□ -0.84
CDC42-205ENST00000498236 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 TATP17735 454 aaPredicted RBP9.81□□□□□ -0.84
CDC42-205ENST00000498236 AAMPQ13685 434 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
CDC42-205ENST00000498236 ZNF530Q6P9A1 599 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms