RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PI4KAP1Q8N8J0 262 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 C8orf37Q96NL8 207 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 BACH2Q9BYV9 841 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 MAP3K2Q9Y2U5 619 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 COL24A1Q17RW2 1714 aa10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 DDB1Q16531 1140 aa10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 C8orf34Q49A92 452 aa10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 KSR2Q6VAB6 950 aa10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 ZBTB47Q9UFB7 747 aaPredicted RBP10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 LRRFIP2Q9Y608 721 aaKnown RBP10.08□□□□□ -0.8
PDZRN3-212ENST00000498048 ARAP2Q8WZ64 1704 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 IBTKQ9P2D0 1353 aaPredicted RBP10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 EXOC5O00471 708 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 ANP32AP39687 249 aaKnown RBP10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 AIMP1Q12904 312 aaKnown RBP10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 PDIA6Q15084 440 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 CHD1LQ86WJ1 897 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 UNC5CLQ8IV45 518 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 MYH13Q9UKX3 1938 aa10.07□□□□□ -0.8
PDZRN3-212ENST00000498048 A0A0G2JS52 829 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 PTCD1O75127 700 aaKnown RBP10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 PIP4K2AP48426 406 aaPredicted RBP10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 NEXNQ0ZGT2 675 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 ANKRD45Q5TZF3 282 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 UBR3Q6ZT12 1888 aa10.06□□□□□ -0.8
PDZRN3-212ENST00000498048 VPS72Q15906 364 aa10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 SYTL4Q96C24 671 aaPredicted RBP10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 USP16Q9Y5T5 823 aa10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 ATRNO75882 1429 aa10.05□□□□□ -0.8
PDZRN3-212ENST00000498048 MYT1Q01538 1121 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 COPS6Q7L5N1 327 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 PIGBQ92521 554 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 MYD88Q99836 296 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 LRP5O75197 1615 aa10.04□□□□□ -0.8
PDZRN3-212ENST00000498048 PNMA6EA0A0J9YXQ4 647 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 APBB1O00213 710 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 HSPA1LP34931 641 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 C9orf78Q9NZ63 289 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 ASAP1Q9ULH1 1129 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 RGPD3A6NKT7 1758 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 RGPD4Q7Z3J3 1758 aa10.03□□□□□ -0.8
PDZRN3-212ENST00000498048 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
PDZRN3-212ENST00000498048 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 GRM8O00222 908 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 DNAJC10Q8IXB1 793 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 PLBD2Q8NHP8 589 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 TEX13AQ9BXU3 409 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 USP21Q9UK80 565 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 EXOC6BQ9Y2D4 811 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 AFF2P51816 1311 aa10.02□□□□□ -0.81
PDZRN3-212ENST00000498048 NBPF26B4DH59 902 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 PITPNM1O00562 1244 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 ATP8B2P98198 1209 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 NBPF10Q6P3W6 841 aaKnown RBP10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 KIF6Q6ZMV9 814 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 ANKRD13DQ6ZTN6 518 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 FNBP4Q8N3X1 1017 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 NBPF15Q8N660 670 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 UTYO14607 1347 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 COL15A1P39059 1388 aa10.01□□□□□ -0.81
PDZRN3-212ENST00000498048 SRGAP3O43295 1099 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 SMARCA5O60264 1052 aaPredicted RBP10□□□□□ -0.81
PDZRN3-212ENST00000498048 STARD3NLO95772 234 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 A1BGP04217 495 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 PRIM1P49642 420 aaKnown RBP10□□□□□ -0.81
PDZRN3-212ENST00000498048 BMP2KLQ5H9B9 411 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 PPP1R42Q7Z4L9 355 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
PDZRN3-212ENST00000498048 SSH3Q8TE77 659 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 SUCLG2Q96I99 432 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
PDZRN3-212ENST00000498048 BCL11AQ9H165 835 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms