RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-208ENST00000497539 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 ZCRB1Q8TBF4 217 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 SNRPA1P09661 255 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 NFATC2IPQ8NCF5 419 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 CHMP5Q9NZZ3 219 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 STAP2Q9UGK3 403 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 IL2RBP14784 551 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 PROSER3Q2NL68 480 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
SNRNP200-208ENST00000497539 LINS1Q8NG48 757 aa14.17□□□□□ -0.14
SNRNP200-208ENST00000497539 LRRCC1Q9C099 1032 aa14.17□□□□□ -0.14
SNRNP200-208ENST00000497539 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
SNRNP200-208ENST00000497539 ZNF496Q96IT1 587 aaPredicted RBP14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 MAP3K2Q9Y2U5 619 aa14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 TMEM51Q9NW97 253 aa14.16□□□□□ -0.14
SNRNP200-208ENST00000497539 CABP4P57796 275 aa14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 PDE1AP54750 535 aa14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 C16orf71Q8IYS4 520 aaPredicted RBP14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 SNX21Q969T3 373 aa14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
SNRNP200-208ENST00000497539 USP42Q9H9J4 1324 aaKnown RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 CLCN1P35523 988 aa14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 HSP90AB4PQ58FF6 505 aa14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 SMAP1Q8IYB5 467 aaPredicted RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 OTUD7AQ8TE49 926 aaPredicted RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 PHLPP1O60346 1717 aa14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 PPP1R42Q7Z4L9 355 aa14.14□□□□□ -0.15
SNRNP200-208ENST00000497539 NWD2Q9ULI1 1742 aa14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 CICQ96RK0 1608 aaPredicted RBP14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 SMARCA5O60264 1052 aaPredicted RBP14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 ITGB4P16144 1822 aa14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 ANXA1P04083 346 aa14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 TJP1Q07157 1748 aa14.13□□□□□ -0.15
SNRNP200-208ENST00000497539 SDSP20132 328 aa14.12□□□□□ -0.15
SNRNP200-208ENST00000497539 EXOC6BQ9Y2D4 811 aa14.12□□□□□ -0.15
SNRNP200-208ENST00000497539 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
SNRNP200-208ENST00000497539 GRM8O00222 908 aa14.11□□□□□ -0.15
SNRNP200-208ENST00000497539 GRPEL1Q9HAV7 217 aa14.11□□□□□ -0.15
SNRNP200-208ENST00000497539 MX1P20591 662 aa14.11□□□□□ -0.15
SNRNP200-208ENST00000497539 CASC1Q6TDU7 716 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 KIF1BPQ96EK5 621 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 KIF2CQ99661 725 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 IGKV5-2P06315 115 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 MRE11P49959 708 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 GAS2L3Q86XJ1 694 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
SNRNP200-208ENST00000497539 SRGAP3O43295 1099 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 EPB41L2O43491 1005 aaKnown RBP14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 XAGE3Q8WTP9 111 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 AK9Q5TCS8 1911 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 NEURL1BA8MQ27 555 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 UTP14CQ5TAP6 766 aaKnown RBP14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 TNPO1Q92973 898 aaKnown RBP14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
SNRNP200-208ENST00000497539 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.08□□□□□ -0.15
SNRNP200-208ENST00000497539 EVA1CP58658 441 aa14.08□□□□□ -0.15
SNRNP200-208ENST00000497539 NEXNQ0ZGT2 675 aa14.08□□□□□ -0.15
SNRNP200-208ENST00000497539 ERC1Q8IUD2 1116 aa14.08□□□□□ -0.15
SNRNP200-208ENST00000497539 IL17RAQ96F46 866 aa14.08□□□□□ -0.15
SNRNP200-208ENST00000497539 TPM2P07951 284 aa14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 PLBD2Q8NHP8 589 aa14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 KAZALD1Q96I82 304 aa14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 C9orf78Q9NZ63 289 aaPredicted RBP14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 GCKRQ14397 625 aa14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 COPS6Q7L5N1 327 aa14.08□□□□□ -0.16
SNRNP200-208ENST00000497539 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 ANKRD13DQ6ZTN6 518 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 USP26Q9BXU7 913 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 RREB1Q92766 1687 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 SURF6O75683 361 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 SUCLG2Q96I99 432 aa14.07□□□□□ -0.16
SNRNP200-208ENST00000497539 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 REC8O95072 547 aa14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 RABL6Q3YEC7 729 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 CDCA7Q9BWT1 371 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 STRN4Q9NRL3 753 aa14.06□□□□□ -0.16
SNRNP200-208ENST00000497539 BCL9O00512 1426 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 ESPNB1AK53 854 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms