RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 DLEC1Q9Y238 1755 aa24.38■■□□□ 1.49
RPN1-208ENST00000497415 NUP98P52948 1817 aa24.38■■□□□ 1.49
RPN1-208ENST00000497415 CALD1Q05682 793 aaKnown RBP24.37■■□□□ 1.49
RPN1-208ENST00000497415 HLFQ16534 295 aa24.37■■□□□ 1.49
RPN1-208ENST00000497415 KRT24Q2M2I5 525 aa24.37■■□□□ 1.49
RPN1-208ENST00000497415 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
RPN1-208ENST00000497415 IFT57Q9NWB7 429 aa24.37■■□□□ 1.49
RPN1-208ENST00000497415 MAP3K15Q6ZN16 1313 aa24.36■■□□□ 1.49
RPN1-208ENST00000497415 TTLL7Q6ZT98 887 aa24.36■■□□□ 1.49
RPN1-208ENST00000497415 MBIPQ9NS73 344 aa24.36■■□□□ 1.49
RPN1-208ENST00000497415 HOXB7P09629 217 aa24.35■■□□□ 1.49
RPN1-208ENST00000497415 GNAI1P63096 354 aa24.35■■□□□ 1.49
RPN1-208ENST00000497415 CCDC27Q2M243 656 aa24.35■■□□□ 1.49
RPN1-208ENST00000497415 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
RPN1-208ENST00000497415 ZNF784Q8NCA9 323 aaPredicted RBP24.35■■□□□ 1.49
RPN1-208ENST00000497415 BRIP1Q9BX63 1249 aa24.35■■□□□ 1.49
RPN1-208ENST00000497415 DALRD3Q5D0E6 543 aaKnown RBP24.34■■□□□ 1.49
RPN1-208ENST00000497415 KIF6Q6ZMV9 814 aa24.34■■□□□ 1.49
RPN1-208ENST00000497415 CNBD1Q8NA66 436 aa24.34■■□□□ 1.49
RPN1-208ENST00000497415 PDZRN3Q9UPQ7 1066 aa24.34■■□□□ 1.49
RPN1-208ENST00000497415 NIP7Q9Y221 180 aaKnown RBP eCLIP24.34■■□□□ 1.49
RPN1-208ENST00000497415 C2CD5Q86YS7 1000 aa24.33■■□□□ 1.49
RPN1-208ENST00000497415 H0YIN7 160 aa24.32■■□□□ 1.48
RPN1-208ENST00000497415 PDE6BP35913 854 aa24.32■■□□□ 1.48
RPN1-208ENST00000497415 PROSER3Q2NL68 480 aa24.32■■□□□ 1.48
RPN1-208ENST00000497415 CCDC24Q8N4L8 307 aa24.32■■□□□ 1.48
RPN1-208ENST00000497415 ST5P78524 1137 aa24.31■■□□□ 1.48
RPN1-208ENST00000497415 NBPF5PQ86XG9 351 aaPredicted RBP24.31■■□□□ 1.48
RPN1-208ENST00000497415 DDX21Q9NR30 783 aaKnown RBP eCLIP24.31■■□□□ 1.48
RPN1-208ENST00000497415 ATP10DQ9P241 1426 aa24.31■■□□□ 1.48
RPN1-208ENST00000497415 ANXA1P04083 346 aa24.3■■□□□ 1.48
RPN1-208ENST00000497415 DUSP27Q5VZP5 1158 aa24.3■■□□□ 1.48
RPN1-208ENST00000497415 GIGYF2Q6Y7W6 1299 aaKnown RBP24.3■■□□□ 1.48
RPN1-208ENST00000497415 NECTIN2Q92692 538 aa24.3■■□□□ 1.48
RPN1-208ENST00000497415 TPTE2Q6XPS3 522 aa24.29■■□□□ 1.48
RPN1-208ENST00000497415 WWC1Q8IX03 1113 aa24.29■■□□□ 1.48
RPN1-208ENST00000497415 ZBTB3Q9H5J0 574 aa24.29■■□□□ 1.48
RPN1-208ENST00000497415 COL11A2P13942 1736 aaPredicted RBP24.29■■□□□ 1.48
RPN1-208ENST00000497415 NPHP1O15259 732 aa24.28■■□□□ 1.48
RPN1-208ENST00000497415 HDGFL1Q5TGJ6 251 aa24.28■■□□□ 1.48
RPN1-208ENST00000497415 ARHGAP27Q6ZUM4 889 aa24.28■■□□□ 1.48
RPN1-208ENST00000497415 TTLL6Q8N841 843 aa24.28■■□□□ 1.48
RPN1-208ENST00000497415 ADCY9O60503 1353 aa24.28■■□□□ 1.48
RPN1-208ENST00000497415 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
RPN1-208ENST00000497415 COPS6Q7L5N1 327 aa24.26■■□□□ 1.47
RPN1-208ENST00000497415 CHPF2Q9P2E5 772 aa24.26■■□□□ 1.47
RPN1-208ENST00000497415 SENP3-EIF4A1A0A087X0R7 540 aa24.25■■□□□ 1.47
RPN1-208ENST00000497415 KLRG2A4D1S0 409 aaPredicted RBP24.25■■□□□ 1.47
RPN1-208ENST00000497415 XAGE3Q8WTP9 111 aa24.25■■□□□ 1.47
RPN1-208ENST00000497415 DBF4Q9UBU7 674 aaPredicted RBP24.25■■□□□ 1.47
RPN1-208ENST00000497415 IBTKQ9P2D0 1353 aaPredicted RBP24.25■■□□□ 1.47
RPN1-208ENST00000497415 SRGNP10124 158 aa24.24■■□□□ 1.47
RPN1-208ENST00000497415 NYXQ9GZU5 481 aa24.24■■□□□ 1.47
RPN1-208ENST00000497415 IL16Q14005 1332 aa24.24■■□□□ 1.47
RPN1-208ENST00000497415 UBN2Q6ZU65 1347 aa24.24■■□□□ 1.47
RPN1-208ENST00000497415 FAM177BA6PVY3 158 aa24.23■■□□□ 1.47
RPN1-208ENST00000497415 GPTP24298 496 aa24.23■■□□□ 1.47
RPN1-208ENST00000497415 AIMP1Q12904 312 aaKnown RBP24.23■■□□□ 1.47
RPN1-208ENST00000497415 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
RPN1-208ENST00000497415 FAM9BQ8IZU0 186 aa24.23■■□□□ 1.47
RPN1-208ENST00000497415 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
RPN1-208ENST00000497415 ZNF622Q969S3 477 aaKnown RBP eCLIP24.23■■□□□ 1.47
RPN1-208ENST00000497415 ANKRD36CQ5JPF3 1778 aa24.22■■□□□ 1.47
RPN1-208ENST00000497415 SBF1O95248 1867 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 ARFGEF2Q9Y6D5 1785 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 PARP10Q53GL7 1025 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 SUSD4Q5VX71 490 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 HYPKQ9NX55 129 aa24.21■■□□□ 1.47
RPN1-208ENST00000497415 ELL2O00472 640 aaPredicted RBP24.2■■□□□ 1.46
RPN1-208ENST00000497415 GTF2E1P29083 439 aaPredicted RBP24.2■■□□□ 1.46
RPN1-208ENST00000497415 CNKSR1Q969H4 720 aa24.2■■□□□ 1.46
RPN1-208ENST00000497415 NTSR2O95665 410 aa24.19■■□□□ 1.46
RPN1-208ENST00000497415 HSP90AB3PQ58FF7 597 aa24.19■■□□□ 1.46
RPN1-208ENST00000497415 NUTM1Q86Y26 1132 aa24.19■■□□□ 1.46
RPN1-208ENST00000497415 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
RPN1-208ENST00000497415 TSR2Q969E8 191 aaKnown RBP24.19■■□□□ 1.46
RPN1-208ENST00000497415 SLX4Q8IY92 1834 aa24.19■■□□□ 1.46
RPN1-208ENST00000497415 RIC1Q4ADV7 1423 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 ABCC12Q96J65 1359 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 CACNA1SQ13698 1873 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 NPR1P16066 1061 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 ERFEQ4G0M1 354 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 PPP1R42Q7Z4L9 355 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 PLBD2Q8NHP8 589 aa24.18■■□□□ 1.46
RPN1-208ENST00000497415 TNRC6CQ9HCJ0 1690 aaKnown RBP24.18■■□□□ 1.46
RPN1-208ENST00000497415 TCIRG1Q13488 830 aa24.17■■□□□ 1.46
RPN1-208ENST00000497415 TSPYL6Q8N831 410 aa24.17■■□□□ 1.46
RPN1-208ENST00000497415 CHMP4AQ9BY43 222 aa24.17■■□□□ 1.46
RPN1-208ENST00000497415 CRY2Q49AN0 593 aa24.16■■□□□ 1.46
RPN1-208ENST00000497415 C9orf131Q5VYM1 1079 aa24.16■■□□□ 1.46
RPN1-208ENST00000497415 ANKRD13DQ6ZTN6 518 aa24.16■■□□□ 1.46
RPN1-208ENST00000497415 SALL2Q9Y467 1007 aaPredicted RBP24.16■■□□□ 1.46
RPN1-208ENST00000497415 FER1L6Q2WGJ9 1857 aa24.15■■□□□ 1.46
RPN1-208ENST00000497415 PRPF40BQ6NWY9 871 aaKnown RBP24.15■■□□□ 1.46
RPN1-208ENST00000497415 RNF123Q5XPI4 1314 aa24.14■■□□□ 1.46
RPN1-208ENST00000497415 C21orf2O43822 256 aa24.14■■□□□ 1.45
RPN1-208ENST00000497415 CCDC30Q5VVM6 783 aa24.14■■□□□ 1.45
RPN1-208ENST00000497415 NLRP10Q86W26 655 aa24.14■■□□□ 1.45
RPN1-208ENST00000497415 UTP14AQ9BVJ6 771 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms