RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 MAP3K15Q6ZN16 1313 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 ERVV-1B6SEH8 477 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 PROSER3Q2NL68 480 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 TTLL7Q6ZT98 887 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 COPS6Q7L5N1 327 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 SETDB2Q96T68 719 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
CSNK1E-213ENST00000495232 RGL2O15211 777 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 NPHP1O15259 732 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 TM4SF1P30408 202 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 NFIXQ14938 502 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 FHDC1Q9C0D6 1143 aaPredicted RBP15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 BCORQ6W2J9 1755 aa15.53■□□□□ 0.08
CSNK1E-213ENST00000495232 TBC1D9BQ66K14 1250 aa15.52■□□□□ 0.08
CSNK1E-213ENST00000495232 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.08
CSNK1E-213ENST00000495232 VAMP4O75379 141 aa15.51■□□□□ 0.07
CSNK1E-213ENST00000495232 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
CSNK1E-213ENST00000495232 NIP7Q9Y221 180 aaKnown RBP eCLIP15.51■□□□□ 0.07
CSNK1E-213ENST00000495232 CARMIL3Q8ND23 1372 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 DDX58O95786 925 aaKnown RBP15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 SERPINB2P05120 415 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 DDR1Q08345 913 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 HLFQ16534 295 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 SYT17Q9BSW7 474 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
CSNK1E-213ENST00000495232 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 PHAXQ9H814 394 aaKnown RBP15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 NUP98P52948 1817 aa15.49■□□□□ 0.07
CSNK1E-213ENST00000495232 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-213ENST00000495232 TRMT2AQ8IZ69 625 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-213ENST00000495232 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
CSNK1E-213ENST00000495232 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 GPTP24298 496 aa15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 CACNA1FO60840 1977 aa15.47■□□□□ 0.07
CSNK1E-213ENST00000495232 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
CSNK1E-213ENST00000495232 ST5P78524 1137 aa15.46■□□□□ 0.07
CSNK1E-213ENST00000495232 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
CSNK1E-213ENST00000495232 NYXQ9GZU5 481 aa15.46■□□□□ 0.07
CSNK1E-213ENST00000495232 AFDNP55196 1824 aaKnown RBP15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 ATP10DQ9P241 1426 aa15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 CT47B1P0C2W7 299 aaPredicted RBP15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
CSNK1E-213ENST00000495232 C10orf71Q711Q0 1435 aa15.44■□□□□ 0.06
CSNK1E-213ENST00000495232 TGFB2P61812 414 aa15.44■□□□□ 0.06
CSNK1E-213ENST00000495232 FLIIQ13045 1269 aa15.44■□□□□ 0.06
CSNK1E-213ENST00000495232 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
CSNK1E-213ENST00000495232 NLGN2Q8NFZ4 835 aa15.44■□□□□ 0.06
CSNK1E-213ENST00000495232 PRR5LQ6MZQ0 368 aa15.43■□□□□ 0.06
CSNK1E-213ENST00000495232 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
CSNK1E-213ENST00000495232 G2E3Q7L622 706 aa15.43■□□□□ 0.06
CSNK1E-213ENST00000495232 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
CSNK1E-213ENST00000495232 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
CSNK1E-213ENST00000495232 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 PDE6BP35913 854 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 NEXNQ0ZGT2 675 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 ALDH1L2Q3SY69 923 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CSNK1E-213ENST00000495232 SUSD4Q5VX71 490 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 CCDC24Q8N4L8 307 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 MYD88Q99836 296 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 BRIP1Q9BX63 1249 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 PDZRN3Q9UPQ7 1066 aa15.41■□□□□ 0.06
CSNK1E-213ENST00000495232 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 H0YIN7 160 aa15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 METTL22Q9BUU2 404 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 GOLGB1Q14789 3259 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-213ENST00000495232 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 DPEP1P16444 411 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 GPR162Q16538 588 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 C2CD5Q86YS7 1000 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 MRPL50Q8N5N7 158 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-213ENST00000495232 ISCA1Q9BUE6 129 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms