RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
ITGB1-216ENST00000493758 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-216ENST00000493758 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
ITGB1-216ENST00000493758 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-216ENST00000493758 FAM182BQ5T319 152 aa8.51□□□□□ -1.05
ITGB1-216ENST00000493758 ZCCHC2Q9C0B9 1178 aaKnown RBP8.51□□□□□ -1.05
ITGB1-216ENST00000493758 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
ITGB1-216ENST00000493758 ANKIB1Q9P2G1 1089 aa8.51□□□□□ -1.05
ITGB1-216ENST00000493758 ATXN7O15265 892 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-216ENST00000493758 BNIP3LO60238 219 aa8.5□□□□□ -1.05
ITGB1-216ENST00000493758 PRMT3O60678 531 aa8.5□□□□□ -1.05
ITGB1-216ENST00000493758 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
ITGB1-216ENST00000493758 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-216ENST00000493758 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
ITGB1-216ENST00000493758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
ITGB1-216ENST00000493758 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
ITGB1-216ENST00000493758 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-216ENST00000493758 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 GPR25O00155 361 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 KCNQ4P56696 695 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 TNP2Q05952 138 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 SUSD3Q96L08 255 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 LRRC4BQ9NT99 713 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
ITGB1-216ENST00000493758 LGR5O75473 907 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 FGFR3P22607 806 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 SSFA2P28290 1259 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 MAP2K3P46734 347 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 TYRO3Q06418 890 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 HCN2Q9UL51 889 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 NSFL1CQ9UNZ2 370 aaKnown RBP8.47□□□□□ -1.05
ITGB1-216ENST00000493758 GJA3Q9Y6H8 435 aa8.47□□□□□ -1.05
ITGB1-216ENST00000493758 MAPTP10636 758 aaKnown RBP8.46□□□□□ -1.06
ITGB1-216ENST00000493758 MX2P20592 715 aa8.46□□□□□ -1.06
ITGB1-216ENST00000493758 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.06
ITGB1-216ENST00000493758 ARID3AQ99856 593 aa8.46□□□□□ -1.06
ITGB1-216ENST00000493758 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-216ENST00000493758 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 PDE4CQ08493 712 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
ITGB1-216ENST00000493758 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 IGF1RP08069 1367 aa8.45□□□□□ -1.06
ITGB1-216ENST00000493758 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 C16orf46Q6P387 395 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
ITGB1-216ENST00000493758 COX20Q5RI15 118 aa8.43□□□□□ -1.06
ITGB1-216ENST00000493758 ZNF280CQ8ND82 737 aa8.43□□□□□ -1.06
ITGB1-216ENST00000493758 NEUROD4Q9HD90 331 aa8.43□□□□□ -1.06
ITGB1-216ENST00000493758 LRFN2Q9ULH4 789 aa8.43□□□□□ -1.06
ITGB1-216ENST00000493758 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
ITGB1-216ENST00000493758 ARAFP10398 606 aa8.42□□□□□ -1.06
ITGB1-216ENST00000493758 DGKZQ13574 1117 aa8.42□□□□□ -1.06
ITGB1-216ENST00000493758 C11orf91Q3C1V1 193 aa8.42□□□□□ -1.06
ITGB1-216ENST00000493758 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
ITGB1-216ENST00000493758 GDF2Q9UK05 429 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-216ENST00000493758 TNFRSF10BO14763 440 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
ITGB1-216ENST00000493758 SLCO4C1Q6ZQN7 724 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 EFCC1Q9HA90 598 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 MARK1Q9P0L2 795 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 STK17AQ9UEE5 414 aa8.41□□□□□ -1.06
ITGB1-216ENST00000493758 C2CD2LO14523 706 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 BMP4P12644 408 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 INPP5BP32019 993 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 CTBSQ01459 385 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 ZNF385CQ66K41 422 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-216ENST00000493758 GOLGA6L1Q8N7Z2 621 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-216ENST00000493758 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 KLK14Q9P0G3 267 aa8.4□□□□□ -1.06
ITGB1-216ENST00000493758 CD33P20138 364 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 HELQQ8TDG4 1101 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 ACDQ96AP0 544 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
ITGB1-216ENST00000493758 EPB42P16452 691 aa8.38□□□□□ -1.07
ITGB1-216ENST00000493758 ARSDP51689 593 aa8.38□□□□□ -1.07
ITGB1-216ENST00000493758 MDFIQ99750 246 aa8.38□□□□□ -1.07
ITGB1-216ENST00000493758 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
ITGB1-216ENST00000493758 KCNH4Q9UQ05 1017 aa8.38□□□□□ -1.07
ITGB1-216ENST00000493758 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 MICAL2O94851 1124 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 CELA2BP08218 269 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-216ENST00000493758 ADH6P28332 368 aa8.37□□□□□ -1.07
ITGB1-216ENST00000493758 IDH3AP50213 366 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms