RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 TATP17735 454 aaPredicted RBP10.53□□□□□ -0.72
SMG7-208ENST00000493609 PTSQ03393 145 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 RTN1Q16799 776 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 C1orf53Q5VUE5 145 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
SMG7-208ENST00000493609 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
SMG7-208ENST00000493609 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
SMG7-208ENST00000493609 DGKZQ13574 1117 aa10.52□□□□□ -0.73
SMG7-208ENST00000493609 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
SMG7-208ENST00000493609 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
SMG7-208ENST00000493609 MYO19Q96H55 970 aa10.52□□□□□ -0.73
SMG7-208ENST00000493609 DYRK1BQ9Y463 629 aa10.52□□□□□ -0.73
SMG7-208ENST00000493609 SOWAHDA6NJG2 315 aa10.51□□□□□ -0.73
SMG7-208ENST00000493609 H3BRB1 525 aa10.51□□□□□ -0.73
SMG7-208ENST00000493609 ARSJQ5FYB0 599 aaPredicted RBP10.51□□□□□ -0.73
SMG7-208ENST00000493609 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
SMG7-208ENST00000493609 TUT1Q9H6E5 874 aaKnown RBP10.51□□□□□ -0.73
SMG7-208ENST00000493609 EGFL7Q9UHF1 273 aa10.51□□□□□ -0.73
SMG7-208ENST00000493609 SLC35F4A4IF30 521 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 TNFRSF10BO14763 440 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 ICMTO60725 284 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMG7-208ENST00000493609 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 ZIC5Q96T25 663 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
SMG7-208ENST00000493609 F11P03951 625 aa10.49□□□□□ -0.73
SMG7-208ENST00000493609 KRT76Q01546 638 aa10.49□□□□□ -0.73
SMG7-208ENST00000493609 C11orf91Q3C1V1 193 aa10.49□□□□□ -0.73
SMG7-208ENST00000493609 RIPOR1Q6ZS17 1223 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 GLYCTKQ8IVS8 523 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 HSH2DQ96JZ2 352 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 STIM2Q9P246 746 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
SMG7-208ENST00000493609 A0A1W2PNR3 127 aa10.47□□□□□ -0.73
SMG7-208ENST00000493609 MPSTP25325 297 aa10.47□□□□□ -0.73
SMG7-208ENST00000493609 SF3B2Q13435 895 aaKnown RBP10.47□□□□□ -0.73
SMG7-208ENST00000493609 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
SMG7-208ENST00000493609 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
SMG7-208ENST00000493609 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
SMG7-208ENST00000493609 ZBTB39O15060 712 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.73
SMG7-208ENST00000493609 ECM1Q16610 540 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 SND1Q7KZF4 910 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMG7-208ENST00000493609 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 IFT43Q96FT9 208 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 CNTNAP3BQ96NU0 1288 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.73
SMG7-208ENST00000493609 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
SMG7-208ENST00000493609 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
SMG7-208ENST00000493609 NEUROD4Q9HD90 331 aa10.45□□□□□ -0.74
SMG7-208ENST00000493609 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
SMG7-208ENST00000493609 CUEDC1Q9NWM3 386 aaPredicted RBP10.44□□□□□ -0.74
SMG7-208ENST00000493609 FAM13AO94988 1023 aa10.43□□□□□ -0.74
SMG7-208ENST00000493609 THBS1P07996 1170 aa10.43□□□□□ -0.74
SMG7-208ENST00000493609 NPR3P17342 541 aa10.43□□□□□ -0.74
SMG7-208ENST00000493609 COL25A1Q9BXS0 654 aaPredicted RBP10.43□□□□□ -0.74
SMG7-208ENST00000493609 GPC6Q9Y625 555 aaPredicted RBP10.43□□□□□ -0.74
SMG7-208ENST00000493609 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
SMG7-208ENST00000493609 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
SMG7-208ENST00000493609 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
SMG7-208ENST00000493609 DBN1Q16643 649 aa10.42□□□□□ -0.74
SMG7-208ENST00000493609 ATCAYQ86WG3 371 aa10.42□□□□□ -0.74
SMG7-208ENST00000493609 TREML1Q86YW5 311 aa10.42□□□□□ -0.74
SMG7-208ENST00000493609 ANKIB1Q9P2G1 1089 aa10.42□□□□□ -0.74
SMG7-208ENST00000493609 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 MICAL2O94851 1124 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 HIF1AQ16665 826 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 NOM1Q5C9Z4 860 aaKnown RBP10.41□□□□□ -0.74
SMG7-208ENST00000493609 EFHC2Q5JST6 749 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 RNFT1Q5M7Z0 435 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 TMCO4Q5TGY1 634 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 VWA5B2Q8N398 1253 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
SMG7-208ENST00000493609 ITGA6P23229 1130 aa10.4□□□□□ -0.74
SMG7-208ENST00000493609 AAMPQ13685 434 aa10.4□□□□□ -0.74
SMG7-208ENST00000493609 SUZ12Q15022 739 aaKnown RBP10.4□□□□□ -0.74
SMG7-208ENST00000493609 NUCKS1Q9H1E3 243 aaKnown RBP10.4□□□□□ -0.74
SMG7-208ENST00000493609 DMGDHQ9UI17 866 aaKnown RBP10.4□□□□□ -0.74
SMG7-208ENST00000493609 BTLAQ7Z6A9 289 aa10.39□□□□□ -0.75
SMG7-208ENST00000493609 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
SMG7-208ENST00000493609 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
SMG7-208ENST00000493609 H7C1W4 665 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 ZAP70P43403 619 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 GSK3AP49840 483 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 IDH3AP50213 366 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 IER5Q5VY09 327 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 TRIM22Q8IYM9 498 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 CEP63Q96MT8 703 aa10.38□□□□□ -0.75
SMG7-208ENST00000493609 CDC14CA4D256 554 aa10.37□□□□□ -0.75
SMG7-208ENST00000493609 OPLAHO14841 1288 aa10.37□□□□□ -0.75
SMG7-208ENST00000493609 KCNMA1Q12791 1236 aa10.37□□□□□ -0.75
SMG7-208ENST00000493609 UBAP2LQ14157 1087 aaKnown RBP10.37□□□□□ -0.75
SMG7-208ENST00000493609 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
SMG7-208ENST00000493609 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms