RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
TRIM11-204ENST00000493030 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.123e-6■□□□□ 10.3
TRIM11-204ENST00000493030 ANXA1P04083 346 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 CETN2P41208 172 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 PLB1Q6P1J6 1458 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 RAB11FIP4Q86YS3 637 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 GOLGA6L7A0A1B0GV03 622 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 WDHD1O75717 1129 aaPredicted RBP15.8■□□□□ 0.12
TRIM11-204ENST00000493030 TOP1P11387 765 aaKnown RBP15.8■□□□□ 0.12
TRIM11-204ENST00000493030 SSFA2P28290 1259 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 CPLX3Q8WVH0 158 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
TRIM11-204ENST00000493030 FEZ1Q99689 392 aa15.8■□□□□ 0.12
TRIM11-204ENST00000493030 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
TRIM11-204ENST00000493030 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 TMEM67Q5HYA8 995 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 MBIPQ9NS73 344 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 TFIP11Q9UBB9 837 aaKnown RBP15.79■□□□□ 0.12
TRIM11-204ENST00000493030 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
TRIM11-204ENST00000493030 TSPY2A6NKD2 308 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
TRIM11-204ENST00000493030 PTPN14Q15678 1187 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 ABCC5O15440 1437 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 NOS1P29475 1434 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 TTF1Q15361 905 aaPredicted RBP15.78■□□□□ 0.12
TRIM11-204ENST00000493030 VPS36Q86VN1 386 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
TRIM11-204ENST00000493030 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 FBLN1P23142 703 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 BIN1O00499 593 aa15.78■□□□□ 0.12
TRIM11-204ENST00000493030 NUP88Q99567 741 aaPredicted RBP15.78■□□□□ 0.12
TRIM11-204ENST00000493030 ZSCAN12O43309 604 aa15.77■□□□□ 0.12
TRIM11-204ENST00000493030 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.12
TRIM11-204ENST00000493030 GJB2P29033 226 aa15.77■□□□□ 0.12
TRIM11-204ENST00000493030 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
TRIM11-204ENST00000493030 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRIM11-204ENST00000493030 CCDC97Q96F63 343 aaPredicted RBP15.77■□□□□ 0.12
TRIM11-204ENST00000493030 ACEP12821 1306 aa15.77■□□□□ 0.12
TRIM11-204ENST00000493030 LRPPRCP42704 1394 aaKnown RBP15.77■□□□□ 0.12
TRIM11-204ENST00000493030 KIF5CO60282 957 aa15.77■□□□□ 0.12
TRIM11-204ENST00000493030 MACROD2A1Z1Q3 448 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 IDEP14735 1019 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 CCDC113Q9H0I3 377 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 RFC4P35249 363 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 KIF4BQ2VIQ3 1234 aa15.77■□□□□ 0.11
TRIM11-204ENST00000493030 FGFR1OPO95684 399 aaKnown RBP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 CRACR2AQ9BSW2 395 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 KAT14Q9H8E8 782 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 PLEKHH1Q9ULM0 1364 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 BAG4O95429 457 aaKnown RBP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 BAG3O95817 575 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 LDHCP07864 332 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 ANAPC15P60006 121 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 MFSD6Q6ZSS7 791 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 TBC1D9Q6ZT07 1266 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 URI1O94763 535 aaPredicted RBP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 PDE4BQ07343 736 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 SPTY2D1Q68D10 685 aaPredicted RBP15.76■□□□□ 0.11
TRIM11-204ENST00000493030 DNAI2Q9GZS0 605 aa15.76■□□□□ 0.11
TRIM11-204ENST00000493030 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
TRIM11-204ENST00000493030 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TMX1Q9H3N1 280 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 KIF5BP33176 963 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 ZSCAN30Q86W11 494 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 CTNNBL1Q8WYA6 563 aaPredicted RBP15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TNNT1P13805 278 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TCERG1LQ5VWI1 586 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
TRIM11-204ENST00000493030 CASQ1P31415 396 aa15.75■□□□□ 0.11
TRIM11-204ENST00000493030 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
TRIM11-204ENST00000493030 KIF20AO95235 890 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 MTIF2P46199 727 aaKnown RBP15.74■□□□□ 0.11
TRIM11-204ENST00000493030 METAP2P50579 478 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRIM11-204ENST00000493030 LUZP1Q86V48 1076 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 CABP5Q9NP86 173 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 CTAGE5O15320 804 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 CCDC150Q8NCX0 1101 aa15.74■□□□□ 0.11
TRIM11-204ENST00000493030 CCDC12Q8WUD4 166 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms