RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
CMSS1-206ENST00000491299 EIF4A2Q14240 407 aaKnown RBP11.61□□□□□ -0.55
CMSS1-206ENST00000491299 EYA1Q99502 592 aa11.61□□□□□ -0.55
CMSS1-206ENST00000491299 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
CMSS1-206ENST00000491299 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
CMSS1-206ENST00000491299 CC2D1BQ5T0F9 858 aaKnown RBP11.6□□□□□ -0.55
CMSS1-206ENST00000491299 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
CMSS1-206ENST00000491299 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
CMSS1-206ENST00000491299 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
CMSS1-206ENST00000491299 PTPN5P54829 565 aa11.59□□□□□ -0.55
CMSS1-206ENST00000491299 TESPA1A2RU30 521 aaPredicted RBP11.58□□□□□ -0.56
CMSS1-206ENST00000491299 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
CMSS1-206ENST00000491299 THSD4Q6ZMP0 1018 aa11.58□□□□□ -0.56
CMSS1-206ENST00000491299 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
CMSS1-206ENST00000491299 ITGB4P16144 1822 aa11.58□□□□□ -0.56
CMSS1-206ENST00000491299 IGSF1Q8N6C5 1336 aa11.58□□□□□ -0.56
CMSS1-206ENST00000491299 LY75O60449 1722 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-206ENST00000491299 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-206ENST00000491299 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 ANKK1Q8NFD2 765 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
CMSS1-206ENST00000491299 NPDC1Q9NQX5 325 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-206ENST00000491299 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
CMSS1-206ENST00000491299 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 SMAPO00193 183 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 CYP27B1O15528 508 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-206ENST00000491299 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
CMSS1-206ENST00000491299 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
CMSS1-206ENST00000491299 TOGARAM1Q9Y4F4 1720 aa11.55□□□□□ -0.56
CMSS1-206ENST00000491299 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
CMSS1-206ENST00000491299 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
CMSS1-206ENST00000491299 MTHFSP49914 203 aa11.55□□□□□ -0.56
CMSS1-206ENST00000491299 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
CMSS1-206ENST00000491299 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
CMSS1-206ENST00000491299 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-206ENST00000491299 BCAMP50895 628 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-206ENST00000491299 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
CMSS1-206ENST00000491299 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
CMSS1-206ENST00000491299 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
CMSS1-206ENST00000491299 PHKG2P15735 406 aa11.53□□□□□ -0.56
CMSS1-206ENST00000491299 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
CMSS1-206ENST00000491299 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
CMSS1-206ENST00000491299 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
CMSS1-206ENST00000491299 C5P01031 1676 aa11.52□□□□□ -0.56
CMSS1-206ENST00000491299 IL13P35225 146 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 PTGDRQ13258 359 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.57
CMSS1-206ENST00000491299 NUDT18Q6ZVK8 323 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 TATDN2Q93075 761 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 LRRC4BQ9NT99 713 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 KDRP35968 1356 aa11.52□□□□□ -0.57
CMSS1-206ENST00000491299 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
CMSS1-206ENST00000491299 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
CMSS1-206ENST00000491299 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
CMSS1-206ENST00000491299 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
CMSS1-206ENST00000491299 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
CMSS1-206ENST00000491299 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
CMSS1-206ENST00000491299 KCNQ4P56696 695 aa11.5□□□□□ -0.57
CMSS1-206ENST00000491299 ZNF827Q17R98 1081 aa11.5□□□□□ -0.57
CMSS1-206ENST00000491299 PIGBQ92521 554 aa11.5□□□□□ -0.57
CMSS1-206ENST00000491299 TUBGCP6Q96RT7 1819 aa11.5□□□□□ -0.57
CMSS1-206ENST00000491299 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
CMSS1-206ENST00000491299 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
CMSS1-206ENST00000491299 U2SURPO15042 1029 aaKnown RBP11.49□□□□□ -0.57
CMSS1-206ENST00000491299 HMOX1P09601 288 aa11.49□□□□□ -0.57
CMSS1-206ENST00000491299 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
CMSS1-206ENST00000491299 CABP4P57796 275 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 AK7Q96M32 723 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-206ENST00000491299 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-206ENST00000491299 NUDCQ9Y266 331 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
CMSS1-206ENST00000491299 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
CMSS1-206ENST00000491299 FCHSD2O94868 740 aa11.47□□□□□ -0.57
CMSS1-206ENST00000491299 POLD1P28340 1107 aa11.47□□□□□ -0.57
CMSS1-206ENST00000491299 AKAP4Q5JQC9 854 aa11.47□□□□□ -0.57
CMSS1-206ENST00000491299 FLAD1Q8NFF5 587 aa11.47□□□□□ -0.57
CMSS1-206ENST00000491299 PNPLA7Q6ZV29 1317 aa11.46□□□□□ -0.57
CMSS1-206ENST00000491299 LOC102724428A0A0B4J2F2 783 aa11.46□□□□□ -0.57
CMSS1-206ENST00000491299 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
CMSS1-206ENST00000491299 SIK1P57059 783 aa11.46□□□□□ -0.57
CMSS1-206ENST00000491299 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
CMSS1-206ENST00000491299 KDM6AO15550 1401 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms