RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
CRNKL1-204ENST00000490910 VPS18Q9P253 973 aa13.15□□□□□ -0.3
CRNKL1-204ENST00000490910 BIN1O00499 593 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 KIF5CO60282 957 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 CUL4AQ13619 759 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 ZDHHC9Q9Y397 364 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
CRNKL1-204ENST00000490910 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 OAS2P29728 719 aaKnown RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 HNRNPH2P55795 449 aaKnown RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 AACSQ86V21 672 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 ANKRD7Q92527 254 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 SIL1Q9H173 461 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 CLSTN2Q9H4D0 955 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 MORC2Q9Y6X9 1032 aaPredicted RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 TEFQ10587 303 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
CRNKL1-204ENST00000490910 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 RAD50Q92878 1312 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 CCDC91Q7Z6B0 441 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 GOLGA1Q92805 767 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 RASSF8Q8NHQ8 419 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 CENPHQ9H3R5 247 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 CARD6Q9BX69 1037 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■□□ 15.9
CRNKL1-204ENST00000490910 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
CRNKL1-204ENST00000490910 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 CPA1P15085 419 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 EFCC1Q9HA90 598 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 FYB1O15117 783 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 NAA30Q147X3 362 aaPredicted RBP13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 SYNMO15061 1565 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 LRRC8AQ8IWT6 810 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
CRNKL1-204ENST00000490910 TRDNQ13061 729 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 ELP1O95163 1332 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 UBASH3AP57075 661 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 ABCC4O15439 1325 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 LIG1P18858 919 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
CRNKL1-204ENST00000490910 RGS12O14924 1447 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 MYCBPQ99417 103 aaPredicted RBP13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 PHACTR2O75167 634 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 MCM3P25205 808 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 HSPA4P34932 840 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 FLIIQ13045 1269 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 NOS1P29475 1434 aa13.09□□□□□ -0.31
CRNKL1-204ENST00000490910 DTNBO60941 627 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 BRF1Q92994 677 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 PHACTR3Q96KR7 559 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 324 ms