RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 CD33P20138 364 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 BEND7Q8N7W2 519 aaPredicted RBP9.42□□□□□ -0.9
NF1-214ENST00000490416 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 EDARADDQ8WWZ3 215 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
NF1-214ENST00000490416 ARAFP10398 606 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 GSK3AP49840 483 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 LAMC2Q13753 1193 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 SLCO4C1Q6ZQN7 724 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 ANKMY2Q8IV38 441 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
NF1-214ENST00000490416 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
NF1-214ENST00000490416 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.9
NF1-214ENST00000490416 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
NF1-214ENST00000490416 PRR12Q9ULL5 1215 aa9.4□□□□□ -0.9
NF1-214ENST00000490416 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
NF1-214ENST00000490416 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
NF1-214ENST00000490416 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
NF1-214ENST00000490416 C7orf43Q8WVR3 580 aa9.39□□□□□ -0.91
NF1-214ENST00000490416 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
NF1-214ENST00000490416 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 SHISA8B8ZZ34 492 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 EFSO43281 561 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 C21orf2O43822 256 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 AMPD1P23109 780 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 ADH6P28332 368 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
NF1-214ENST00000490416 C2orf49Q9BVC5 232 aaPredicted RBP9.38□□□□□ -0.91
NF1-214ENST00000490416 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
NF1-214ENST00000490416 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
NF1-214ENST00000490416 RFX1P22670 979 aa9.37□□□□□ -0.91
NF1-214ENST00000490416 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
NF1-214ENST00000490416 EPXP11678 715 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 HIF1AQ16665 826 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 ALDH16A1Q8IZ83 802 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 KCTD17Q8N5Z5 321 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 STRN4Q9NRL3 753 aa9.36□□□□□ -0.91
NF1-214ENST00000490416 LGR5O75473 907 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 IGFBP4P22692 258 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 ZNF468Q5VIY5 522 aaPredicted RBP9.35□□□□□ -0.91
NF1-214ENST00000490416 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 HSH2DQ96JZ2 352 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 HCN2Q9UL51 889 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
NF1-214ENST00000490416 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
NF1-214ENST00000490416 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
NF1-214ENST00000490416 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
NF1-214ENST00000490416 ARXQ96QS3 562 aa9.33□□□□□ -0.92
NF1-214ENST00000490416 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
NF1-214ENST00000490416 SNRPNP63162 240 aaKnown RBP9.32□□□□□ -0.92
NF1-214ENST00000490416 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
NF1-214ENST00000490416 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
NF1-214ENST00000490416 KLF15Q9UIH9 416 aa9.32□□□□□ -0.92
NF1-214ENST00000490416 PIK3R2O00459 728 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 RTN1Q16799 776 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 SYT9Q86SS6 491 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
NF1-214ENST00000490416 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
NF1-214ENST00000490416 TYRO3Q06418 890 aa9.3□□□□□ -0.92
NF1-214ENST00000490416 CHSY3Q70JA7 882 aa9.3□□□□□ -0.92
NF1-214ENST00000490416 FOXO3O43524 673 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 ALAS2P22557 587 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 WEE1P30291 646 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 BTLAQ7Z6A9 289 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
NF1-214ENST00000490416 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
NF1-214ENST00000490416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
NF1-214ENST00000490416 SIN3BO75182 1162 aa9.28□□□□□ -0.92
NF1-214ENST00000490416 KCNQ4P56696 695 aa9.28□□□□□ -0.92
NF1-214ENST00000490416 GRIN2CQ14957 1233 aa9.28□□□□□ -0.92
NF1-214ENST00000490416 SLC30A3Q99726 388 aa9.28□□□□□ -0.92
NF1-214ENST00000490416 ELOA3CA0A087WX78 387 aaPredicted RBP9.27□□□□□ -0.93
NF1-214ENST00000490416 ELOA3DA6NLF2 546 aaPredicted RBP9.27□□□□□ -0.93
NF1-214ENST00000490416 GNB5O14775 395 aa9.27□□□□□ -0.93
NF1-214ENST00000490416 ELOA3BQ3SY89 546 aa9.27□□□□□ -0.93
NF1-214ENST00000490416 IER5Q5VY09 327 aa9.27□□□□□ -0.93
NF1-214ENST00000490416 GPAT2Q6NUI2 795 aa9.27□□□□□ -0.93
NF1-214ENST00000490416 ELOA3Q8NG57 546 aa9.27□□□□□ -0.93
NF1-214ENST00000490416 TGFBR3LH3BV60 316 aa9.26□□□□□ -0.93
NF1-214ENST00000490416 IGHA1P01876 353 aa9.26□□□□□ -0.93
NF1-214ENST00000490416 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
NF1-214ENST00000490416 LINC00114Q6XXX2 140 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms