RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 C1orf229Q6ZS94 237 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-218ENST00000490032 ANKMY2Q8IV38 441 aa8.21□□□□□ -1.1
HMGN1-218ENST00000490032 CHMP3Q9Y3E7 222 aa8.21□□□□□ -1.1
HMGN1-218ENST00000490032 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
HMGN1-218ENST00000490032 KHNYNO15037 678 aaKnown RBP8.2□□□□□ -1.1
HMGN1-218ENST00000490032 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-218ENST00000490032 ARAFP10398 606 aa8.2□□□□□ -1.1
HMGN1-218ENST00000490032 RASSF7Q02833 373 aa8.2□□□□□ -1.1
HMGN1-218ENST00000490032 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
HMGN1-218ENST00000490032 NEDD1Q8NHV4 660 aa8.2□□□□□ -1.1
HMGN1-218ENST00000490032 ARXQ96QS3 562 aa8.2□□□□□ -1.1
HMGN1-218ENST00000490032 C2orf49Q9BVC5 232 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-218ENST00000490032 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
HMGN1-218ENST00000490032 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
HMGN1-218ENST00000490032 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
HMGN1-218ENST00000490032 AVENQ9NQS1 362 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-218ENST00000490032 SHISA8B8ZZ34 492 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 CD33P20138 364 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 KANK3Q6NY19 840 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 LRRC69Q6ZNQ3 347 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 EDARADDQ8WWZ3 215 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 SCG3Q8WXD2 468 aaKnown RBP8.18□□□□□ -1.1
HMGN1-218ENST00000490032 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 HCN4Q9Y3Q4 1203 aa8.18□□□□□ -1.1
HMGN1-218ENST00000490032 IRS1P35568 1242 aa8.17□□□□□ -1.1
HMGN1-218ENST00000490032 MARK1Q9P0L2 795 aa8.17□□□□□ -1.1
HMGN1-218ENST00000490032 GDF11O95390 407 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 EPXP11678 715 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 IGFBP4P22692 258 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 ALDH16A1Q8IZ83 802 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-218ENST00000490032 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 HINFPQ9BQA5 517 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 NEUROD4Q9HD90 331 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
HMGN1-218ENST00000490032 DNMT3AQ9Y6K1 912 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-218ENST00000490032 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.1
HMGN1-218ENST00000490032 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
HMGN1-218ENST00000490032 ADH6P28332 368 aa8.15□□□□□ -1.1
HMGN1-218ENST00000490032 ZNF468Q5VIY5 522 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-218ENST00000490032 PODNQ7Z5L7 613 aa8.15□□□□□ -1.1
HMGN1-218ENST00000490032 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
HMGN1-218ENST00000490032 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
HMGN1-218ENST00000490032 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
HMGN1-218ENST00000490032 SUSD3Q96L08 255 aa8.14□□□□□ -1.11
HMGN1-218ENST00000490032 RFX1P22670 979 aa8.13□□□□□ -1.11
HMGN1-218ENST00000490032 WEE1P30291 646 aa8.13□□□□□ -1.11
HMGN1-218ENST00000490032 SNRPNP63162 240 aaKnown RBP8.13□□□□□ -1.11
HMGN1-218ENST00000490032 SRPK2P78362 688 aaKnown RBP8.13□□□□□ -1.11
HMGN1-218ENST00000490032 FCHSD1Q86WN1 690 aa8.13□□□□□ -1.11
HMGN1-218ENST00000490032 ZNF280CQ8ND82 737 aa8.13□□□□□ -1.11
HMGN1-218ENST00000490032 FAM200AQ8TCP9 573 aa8.13□□□□□ -1.11
HMGN1-218ENST00000490032 CHMP7Q8WUX9 453 aaPredicted RBP8.13□□□□□ -1.11
HMGN1-218ENST00000490032 KCNQ4P56696 695 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 TYRO3Q06418 890 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
HMGN1-218ENST00000490032 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
HMGN1-218ENST00000490032 HIF1AQ16665 826 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 RTN1Q16799 776 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 CDCA8Q53HL2 280 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 PRR12Q9ULL5 1215 aa8.12□□□□□ -1.11
HMGN1-218ENST00000490032 FOXO3O43524 673 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 LGR5O75473 907 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 MDFIQ99750 246 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 MKL2Q9ULH7 1088 aa8.11□□□□□ -1.11
HMGN1-218ENST00000490032 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
HMGN1-218ENST00000490032 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
HMGN1-218ENST00000490032 IER5Q5VY09 327 aa8.1□□□□□ -1.11
HMGN1-218ENST00000490032 NGLY1Q96IV0 654 aa8.1□□□□□ -1.11
HMGN1-218ENST00000490032 CEP63Q96MT8 703 aa8.1□□□□□ -1.11
HMGN1-218ENST00000490032 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
HMGN1-218ENST00000490032 BTLAQ7Z6A9 289 aa8.09□□□□□ -1.11
HMGN1-218ENST00000490032 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
HMGN1-218ENST00000490032 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
HMGN1-218ENST00000490032 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
HMGN1-218ENST00000490032 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
HMGN1-218ENST00000490032 SIN3BO75182 1162 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 AMPD1P23109 780 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 DGKGP49619 791 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 SWI5Q1ZZU3 235 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 CHSY3Q70JA7 882 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 RRAGCQ9HB90 399 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 KCNH4Q9UQ05 1017 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 BCS1LQ9Y276 419 aa8.08□□□□□ -1.12
HMGN1-218ENST00000490032 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-218ENST00000490032 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-218ENST00000490032 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-218ENST00000490032 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 TGFBR3LH3BV60 316 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 ATG7O95352 703 aa8.07□□□□□ -1.12
HMGN1-218ENST00000490032 SPEM2Q0P670 501 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms