RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
BRD9-208ENST00000489816 CHGBP05060 677 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 ANP32BQ92688 251 aaKnown RBP18.99■□□□□ 0.63
BRD9-208ENST00000489816 FAM208AQ9UK61 1670 aaKnown RBP18.99■□□□□ 0.63
BRD9-208ENST00000489816 LARGE1O95461 756 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 PTMSP20962 102 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 EAF2Q96CJ1 260 aaPredicted RBP18.99■□□□□ 0.63
BRD9-208ENST00000489816 KAZALD1Q96I82 304 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 USP16Q9Y5T5 823 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 XAGE3Q8WTP9 111 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 MYD88Q99836 296 aa18.99■□□□□ 0.63
BRD9-208ENST00000489816 LSG1Q9H089 658 aaKnown RBP18.99■□□□□ 0.63
BRD9-208ENST00000489816 MARF1Q9Y4F3 1742 aaKnown RBP18.98■□□□□ 0.63
BRD9-208ENST00000489816 GRM8O00222 908 aa18.98■□□□□ 0.63
BRD9-208ENST00000489816 BRD1O95696 1058 aa18.98■□□□□ 0.63
BRD9-208ENST00000489816 JAKMIP1Q96N16 626 aaKnown RBP18.98■□□□□ 0.63
BRD9-208ENST00000489816 SASH1O94885 1247 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 EPHA10Q5JZY3 1008 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 ZNF496Q96IT1 587 aaPredicted RBP18.97■□□□□ 0.63
BRD9-208ENST00000489816 G3BP1Q13283 466 aaKnown RBP eCLIP18.97■□□□□ 0.63
BRD9-208ENST00000489816 CCDC83Q8IWF9 413 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 GLRX3O76003 335 aaKnown RBP18.97■□□□□ 0.63
BRD9-208ENST00000489816 CUL4AQ13619 759 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 ZNF790Q6PG37 636 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 RAD50Q92878 1312 aa18.97■□□□□ 0.63
BRD9-208ENST00000489816 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
BRD9-208ENST00000489816 ANAPC15P60006 121 aa18.96■□□□□ 0.63
BRD9-208ENST00000489816 MCM2P49736 904 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 TAF6LQ9Y6J9 622 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 PDIA6Q15084 440 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 HSP90AB4PQ58FF6 505 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 CNPY2Q9Y2B0 182 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 CHMP3Q9Y3E7 222 aa18.95■□□□□ 0.62
BRD9-208ENST00000489816 NFAT5O94916 1531 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 CLCN1P35523 988 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 USP48Q86UV5 1035 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 ERBB3P21860 1342 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 FIBPO43427 364 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 HOXB7P09629 217 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 LINS1Q8NG48 757 aa18.94■□□□□ 0.62
BRD9-208ENST00000489816 DDX21Q9NR30 783 aaKnown RBP eCLIP18.93■□□□□ 0.62
BRD9-208ENST00000489816 HYPKQ9NX55 129 aa18.93■□□□□ 0.62
BRD9-208ENST00000489816 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
BRD9-208ENST00000489816 LRRC37A3O60309 1634 aa18.93■□□□□ 0.62
BRD9-208ENST00000489816 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
BRD9-208ENST00000489816 ZNF445P59923 1031 aa18.93■□□□□ 0.62
BRD9-208ENST00000489816 ZNF330Q9Y3S2 320 aaPredicted RBP18.93■□□□□ 0.62
BRD9-208ENST00000489816 DDX58O95786 925 aaKnown RBP18.92■□□□□ 0.62
BRD9-208ENST00000489816 NMIQ13287 307 aaPredicted RBP18.92■□□□□ 0.62
BRD9-208ENST00000489816 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
BRD9-208ENST00000489816 FERMT3Q86UX7 667 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 VPS37CA5D8V6 355 aaPredicted RBP18.91■□□□□ 0.62
BRD9-208ENST00000489816 STK3Q13188 491 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 SLFNL1Q499Z3 407 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 FAM173BQ6P4H8 233 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 A0A0D9SFI3 127 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 ALDH1L1O75891 902 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 ATF3P18847 181 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 SYT1P21579 422 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
BRD9-208ENST00000489816 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
BRD9-208ENST00000489816 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 PDRG1Q9NUG6 133 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 LIMCH1Q9UPQ0 1083 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 AOX1Q06278 1338 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 GPATCH3Q96I76 525 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
BRD9-208ENST00000489816 TCHHQ07283 1943 aa18.9■□□□□ 0.62
BRD9-208ENST00000489816 INTS4Q96HW7 963 aaKnown RBP18.89■□□□□ 0.62
BRD9-208ENST00000489816 TTC14Q96N46 770 aa18.89■□□□□ 0.62
BRD9-208ENST00000489816 DNAJC2Q99543 621 aaKnown RBP18.89■□□□□ 0.62
BRD9-208ENST00000489816 NPHP3Q7Z494 1330 aa18.89■□□□□ 0.61
BRD9-208ENST00000489816 PLCB2Q00722 1185 aa18.89■□□□□ 0.61
BRD9-208ENST00000489816 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.61
BRD9-208ENST00000489816 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
BRD9-208ENST00000489816 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
BRD9-208ENST00000489816 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 CYP27B1O15528 508 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 PHKG2P15735 406 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 NPHP4O75161 1426 aaPredicted RBP18.88■□□□□ 0.61
BRD9-208ENST00000489816 PXDNLA1KZ92 1463 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 GJB2P29033 226 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 GCKRQ14397 625 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 ZNF589Q86UQ0 364 aaPredicted RBP18.88■□□□□ 0.61
BRD9-208ENST00000489816 RUFY2Q8WXA3 655 aa18.88■□□□□ 0.61
BRD9-208ENST00000489816 HSPA2P54652 639 aa18.87■□□□□ 0.61
BRD9-208ENST00000489816 LRSAM1Q6UWE0 723 aa18.87■□□□□ 0.61
BRD9-208ENST00000489816 CCDC129Q6ZRS4 1044 aa18.87■□□□□ 0.61
BRD9-208ENST00000489816 SEC62Q99442 399 aaKnown RBP18.87■□□□□ 0.61
BRD9-208ENST00000489816 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
BRD9-208ENST00000489816 WDR33Q9C0J8 1336 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms