RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
SNX17-207ENST00000489402 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
SNX17-207ENST00000489402 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNX17-207ENST00000489402 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
SNX17-207ENST00000489402 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
SNX17-207ENST00000489402 FER1L6Q2WGJ9 1857 aa12.5□□□□□ -0.41
SNX17-207ENST00000489402 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
SNX17-207ENST00000489402 ARFGEF2Q9Y6D5 1785 aa12.49□□□□□ -0.41
SNX17-207ENST00000489402 C21orf2O43822 256 aa12.49□□□□□ -0.41
SNX17-207ENST00000489402 MCM10Q7L590 875 aa12.49□□□□□ -0.41
SNX17-207ENST00000489402 CNKSR1Q969H4 720 aa12.49□□□□□ -0.41
SNX17-207ENST00000489402 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
SNX17-207ENST00000489402 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 SNRPA1P09661 255 aaKnown RBP12.48□□□□□ -0.41
SNX17-207ENST00000489402 PPP2R1AP30153 589 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 TAOK3Q9H2K8 898 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
SNX17-207ENST00000489402 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 POTECB2RU33 542 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 NEFMP07197 916 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
SNX17-207ENST00000489402 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
SNX17-207ENST00000489402 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
SNX17-207ENST00000489402 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
SNX17-207ENST00000489402 SRGNP10124 158 aa12.46□□□□□ -0.41
SNX17-207ENST00000489402 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
SNX17-207ENST00000489402 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.41
SNX17-207ENST00000489402 NBPF15Q8N660 670 aa12.46□□□□□ -0.41
SNX17-207ENST00000489402 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
SNX17-207ENST00000489402 OLFM4Q6UX06 510 aa12.45□□□□□ -0.42
SNX17-207ENST00000489402 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
SNX17-207ENST00000489402 RGL2O15211 777 aa12.44□□□□□ -0.42
SNX17-207ENST00000489402 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
SNX17-207ENST00000489402 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
SNX17-207ENST00000489402 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX17-207ENST00000489402 NPR1P16066 1061 aa12.43□□□□□ -0.42
SNX17-207ENST00000489402 CCDC93Q567U6 631 aa12.43□□□□□ -0.42
SNX17-207ENST00000489402 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
SNX17-207ENST00000489402 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
SNX17-207ENST00000489402 HLFQ16534 295 aa12.42□□□□□ -0.42
SNX17-207ENST00000489402 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
SNX17-207ENST00000489402 IQCA1LA6NCM1 817 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 FAM177BA6PVY3 158 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 DDNO94850 711 aaPredicted RBP12.41□□□□□ -0.42
SNX17-207ENST00000489402 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
SNX17-207ENST00000489402 SCN4AP35499 1836 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
SNX17-207ENST00000489402 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
SNX17-207ENST00000489402 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX17-207ENST00000489402 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
SNX17-207ENST00000489402 RTKN2Q8IZC4 609 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 NUP98P52948 1817 aa12.39□□□□□ -0.43
SNX17-207ENST00000489402 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
SNX17-207ENST00000489402 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
SNX17-207ENST00000489402 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
SNX17-207ENST00000489402 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
SNX17-207ENST00000489402 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
SNX17-207ENST00000489402 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
SNX17-207ENST00000489402 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
SNX17-207ENST00000489402 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
SNX17-207ENST00000489402 NFE2L2Q16236 605 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 ZNF277Q9NRM2 450 aaPredicted RBP12.37□□□□□ -0.43
SNX17-207ENST00000489402 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
SNX17-207ENST00000489402 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
SNX17-207ENST00000489402 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
SNX17-207ENST00000489402 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
SNX17-207ENST00000489402 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
SNX17-207ENST00000489402 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
SNX17-207ENST00000489402 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
SNX17-207ENST00000489402 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
SNX17-207ENST00000489402 COL4A5P29400 1685 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
SNX17-207ENST00000489402 MYL6BP14649 208 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
SNX17-207ENST00000489402 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
SNX17-207ENST00000489402 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
SNX17-207ENST00000489402 GPTP24298 496 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 EPHX2P34913 555 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms