RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
SH3YL1-225ENST00000488979 FER1L6Q2WGJ9 1857 aa13.35□□□□□ -0.27
SH3YL1-225ENST00000488979 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 STARD3NLO95772 234 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 HMOX1P09601 288 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 RGS19P49795 217 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
SH3YL1-225ENST00000488979 RASSF10A6NK89 507 aa13.33□□□□□ -0.28
SH3YL1-225ENST00000488979 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
SH3YL1-225ENST00000488979 TEX13AQ9BXU3 409 aaPredicted RBP13.33□□□□□ -0.28
SH3YL1-225ENST00000488979 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.28
SH3YL1-225ENST00000488979 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 A0A087WZG4 1122 aa13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 MAP1SQ66K74 1059 aaPredicted RBP13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 CNKSR1Q969H4 720 aa13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
SH3YL1-225ENST00000488979 ANKRD31Q8N7Z5 1873 aa13.31□□□□□ -0.28
SH3YL1-225ENST00000488979 SRGNP10124 158 aa13.31□□□□□ -0.28
SH3YL1-225ENST00000488979 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
SH3YL1-225ENST00000488979 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
SH3YL1-225ENST00000488979 HACL1Q9UJ83 578 aa13.31□□□□□ -0.28
SH3YL1-225ENST00000488979 TNRC18O15417 2968 aaPredicted RBP13.3□□□□□ -0.28
SH3YL1-225ENST00000488979 EPHX2P34913 555 aa13.3□□□□□ -0.28
SH3YL1-225ENST00000488979 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
SH3YL1-225ENST00000488979 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 TEFQ10587 303 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
SH3YL1-225ENST00000488979 UBR2Q8IWV8 1755 aa13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 SCN4AP35499 1836 aa13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 IL17REQ8NFR9 667 aa13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
SH3YL1-225ENST00000488979 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 CNBD1Q8NA66 436 aa13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 TSKSQ9UJT2 592 aa13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 RNF123Q5XPI4 1314 aa13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 COL3A1P02461 1466 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-225ENST00000488979 NPHP1O15259 732 aa13.26□□□□□ -0.29
SH3YL1-225ENST00000488979 A1BGP04217 495 aa13.26□□□□□ -0.29
SH3YL1-225ENST00000488979 FKBP4Q02790 459 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■□□ 17
SH3YL1-225ENST00000488979 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
SH3YL1-225ENST00000488979 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
SH3YL1-225ENST00000488979 FMNL2Q96PY5 1086 aa13.26□□□□□ -0.29
SH3YL1-225ENST00000488979 FZD9O00144 591 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 CAMTA2O94983 1202 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 ST5P78524 1137 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 GRM1Q13255 1194 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 CCDC93Q567U6 631 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 CAPNS2Q96L46 248 aa13.25□□□□□ -0.29
SH3YL1-225ENST00000488979 CST9Q5W186 159 aa13.24□□□□□ -0.29
SH3YL1-225ENST00000488979 SYNE4Q8N205 404 aa13.24□□□□□ -0.29
SH3YL1-225ENST00000488979 CFAP53Q96M91 514 aa13.24□□□□□ -0.29
SH3YL1-225ENST00000488979 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
SH3YL1-225ENST00000488979 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
SH3YL1-225ENST00000488979 ADAMTSL1Q8N6G6 1762 aa13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 KLRG2A4D1S0 409 aaPredicted RBP13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 RGL2O15211 777 aa13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 NPR1P16066 1061 aa13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 PAXIP1Q6ZW49 1069 aaPredicted RBP13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 CACNA1SQ13698 1873 aa13.23□□□□□ -0.29
SH3YL1-225ENST00000488979 SIPA1L3O60292 1781 aaPredicted RBP13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 AOC2O75106 756 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 ECE1P42892 770 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 CLEC4GQ6UXB4 293 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 RTKN2Q8IZC4 609 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 GPC2Q8N158 579 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 MCOLN1Q9GZU1 580 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 RSPH6AQ9H0K4 717 aa13.22□□□□□ -0.29
SH3YL1-225ENST00000488979 TRAF5O00463 557 aa13.21□□□□□ -0.29
SH3YL1-225ENST00000488979 EPS15P42566 896 aa13.21□□□□□ -0.29
SH3YL1-225ENST00000488979 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
SH3YL1-225ENST00000488979 NBPF5PQ86XG9 351 aaPredicted RBP13.21□□□□□ -0.29
SH3YL1-225ENST00000488979 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
SH3YL1-225ENST00000488979 GJA3Q9Y6H8 435 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms