RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 DCTN1Q14203 1278 aa24.54■■□□□ 1.52
HDAC6-231ENST00000488905 HTATSF1O43719 755 aaKnown RBP24.53■■□□□ 1.52
HDAC6-231ENST00000488905 ST5P78524 1137 aa24.53■■□□□ 1.52
HDAC6-231ENST00000488905 GLTPD2A6NH11 291 aa24.52■■□□□ 1.52
HDAC6-231ENST00000488905 IFFO2Q5TF58 517 aa24.51■■□□□ 1.51
HDAC6-231ENST00000488905 DNAJC5GQ8N7S2 189 aa24.51■■□□□ 1.51
HDAC6-231ENST00000488905 C21orf2O43822 256 aa24.5■■□□□ 1.51
HDAC6-231ENST00000488905 CLEC4GQ6UXB4 293 aa24.5■■□□□ 1.51
HDAC6-231ENST00000488905 ZNF219Q9P2Y4 722 aaPredicted RBP24.5■■□□□ 1.51
HDAC6-231ENST00000488905 ZNF652Q9Y2D9 606 aa24.5■■□□□ 1.51
HDAC6-231ENST00000488905 SMC1BQ8NDV3 1235 aa24.49■■□□□ 1.51
HDAC6-231ENST00000488905 NUP98P52948 1817 aa24.49■■□□□ 1.51
HDAC6-231ENST00000488905 STYK1Q6J9G0 422 aa24.48■■□□□ 1.51
HDAC6-231ENST00000488905 CNKSR1Q969H4 720 aa24.48■■□□□ 1.51
HDAC6-231ENST00000488905 LTBP3Q9NS15 1303 aa24.47■■□□□ 1.51
HDAC6-231ENST00000488905 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
HDAC6-231ENST00000488905 SRGNP10124 158 aa24.47■■□□□ 1.51
HDAC6-231ENST00000488905 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
HDAC6-231ENST00000488905 PRPF40BQ6NWY9 871 aaKnown RBP24.47■■□□□ 1.51
HDAC6-231ENST00000488905 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
HDAC6-231ENST00000488905 NBPF5PQ86XG9 351 aaPredicted RBP24.47■■□□□ 1.51
HDAC6-231ENST00000488905 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
HDAC6-231ENST00000488905 RGL2O15211 777 aa24.46■■□□□ 1.51
HDAC6-231ENST00000488905 NEFMP07197 916 aa24.46■■□□□ 1.51
HDAC6-231ENST00000488905 VEGFAP15692 232 aaPredicted RBP24.46■■□□□ 1.51
HDAC6-231ENST00000488905 HTRA3P83110 453 aa24.46■■□□□ 1.51
HDAC6-231ENST00000488905 MASTLQ96GX5 879 aa24.46■■□□□ 1.51
HDAC6-231ENST00000488905 TAOK3Q9H2K8 898 aa24.46■■□□□ 1.51
HDAC6-231ENST00000488905 ERFEQ4G0M1 354 aa24.43■■□□□ 1.5
HDAC6-231ENST00000488905 SOGA3Q5TF21 947 aa24.43■■□□□ 1.5
HDAC6-231ENST00000488905 KLRG1Q96E93 195 aa24.43■■□□□ 1.5
HDAC6-231ENST00000488905 MIS18AQ9NYP9 233 aa24.43■■□□□ 1.5
HDAC6-231ENST00000488905 NIP7Q9Y221 180 aaKnown RBP eCLIP24.43■■□□□ 1.5
HDAC6-231ENST00000488905 PLEKHF1Q96S99 279 aa24.42■■□□□ 1.5
HDAC6-231ENST00000488905 DPY19L2Q6NUT2 758 aa24.41■■□□□ 1.5
HDAC6-231ENST00000488905 PNISRQ8TF01 805 aaKnown RBP24.41■■□□□ 1.5
HDAC6-231ENST00000488905 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
HDAC6-231ENST00000488905 KLRG2A4D1S0 409 aaPredicted RBP24.39■■□□□ 1.49
HDAC6-231ENST00000488905 POTECB2RU33 542 aa24.39■■□□□ 1.49
HDAC6-231ENST00000488905 NPR1P16066 1061 aa24.39■■□□□ 1.49
HDAC6-231ENST00000488905 HLFQ16534 295 aa24.39■■□□□ 1.49
HDAC6-231ENST00000488905 TPTE2Q6XPS3 522 aa24.39■■□□□ 1.49
HDAC6-231ENST00000488905 SCN4AP35499 1836 aa24.39■■□□□ 1.49
HDAC6-231ENST00000488905 MAPK8IP3Q9UPT6 1336 aa24.37■■□□□ 1.49
HDAC6-231ENST00000488905 FAM177BA6PVY3 158 aa24.37■■□□□ 1.49
HDAC6-231ENST00000488905 CCDC93Q567U6 631 aa24.37■■□□□ 1.49
HDAC6-231ENST00000488905 JMYQ8N9B5 988 aa24.37■■□□□ 1.49
HDAC6-231ENST00000488905 C7orf43Q8WVR3 580 aa24.37■■□□□ 1.49
HDAC6-231ENST00000488905 EIF4A1P60842 406 aaKnown RBP24.36■■□□□ 1.49
HDAC6-231ENST00000488905 THUMPD2Q9BTF0 503 aaKnown RBP24.36■■□□□ 1.49
HDAC6-231ENST00000488905 ABCC12Q96J65 1359 aa24.35■■□□□ 1.49
HDAC6-231ENST00000488905 PNNQ9H307 717 aaKnown RBP24.35■■□□□ 1.49
HDAC6-231ENST00000488905 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
HDAC6-231ENST00000488905 ERVV-1B6SEH8 477 aa24.33■■□□□ 1.49
HDAC6-231ENST00000488905 NGEFQ8N5V2 710 aa24.33■■□□□ 1.49
HDAC6-231ENST00000488905 RIC1Q4ADV7 1423 aa24.33■■□□□ 1.49
HDAC6-231ENST00000488905 IBTKQ9P2D0 1353 aaPredicted RBP24.32■■□□□ 1.48
HDAC6-231ENST00000488905 DDNO94850 711 aaPredicted RBP24.32■■□□□ 1.48
HDAC6-231ENST00000488905 GTF2E1P29083 439 aaPredicted RBP24.32■■□□□ 1.48
HDAC6-231ENST00000488905 FKBP4Q02790 459 aaKnown RBP eCLIP24.32■■□□□ 1.48
HDAC6-231ENST00000488905 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
HDAC6-231ENST00000488905 NYXQ9GZU5 481 aa24.32■■□□□ 1.48
HDAC6-231ENST00000488905 ANKRD36CQ5JPF3 1778 aa24.31■■□□□ 1.48
HDAC6-231ENST00000488905 TTLL7Q6ZT98 887 aa24.31■■□□□ 1.48
HDAC6-231ENST00000488905 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
HDAC6-231ENST00000488905 MYL6BP14649 208 aa24.3■■□□□ 1.48
HDAC6-231ENST00000488905 OLFM4Q6UX06 510 aa24.3■■□□□ 1.48
HDAC6-231ENST00000488905 SNED1Q8TER0 1413 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 ALDH1B1P30837 517 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 CRY2Q49AN0 593 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 NUTM1Q86Y26 1132 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 UBN2Q6ZU65 1347 aa24.29■■□□□ 1.48
HDAC6-231ENST00000488905 RTKN2Q8IZC4 609 aa24.28■■□□□ 1.48
HDAC6-231ENST00000488905 L3MBTL3Q96JM7 780 aaPredicted RBP24.28■■□□□ 1.48
HDAC6-231ENST00000488905 ZBTB3Q9H5J0 574 aa24.28■■□□□ 1.48
HDAC6-231ENST00000488905 ZNF277Q9NRM2 450 aaPredicted RBP24.28■■□□□ 1.48
HDAC6-231ENST00000488905 POTEIP0CG38 1075 aa24.27■■□□□ 1.48
HDAC6-231ENST00000488905 POTEJP0CG39 1038 aa24.27■■□□□ 1.48
HDAC6-231ENST00000488905 CHADLQ6NUI6 762 aa24.27■■□□□ 1.48
HDAC6-231ENST00000488905 TSPYL4Q9UJ04 414 aa24.27■■□□□ 1.48
HDAC6-231ENST00000488905 IQCA1LA6NCM1 817 aa24.26■■□□□ 1.47
HDAC6-231ENST00000488905 GPTP24298 496 aa24.26■■□□□ 1.47
HDAC6-231ENST00000488905 RALBP1Q15311 655 aa24.26■■□□□ 1.47
HDAC6-231ENST00000488905 ZNF541Q9H0D2 1346 aa24.26■■□□□ 1.47
HDAC6-231ENST00000488905 ADAMTSL1Q8N6G6 1762 aa24.26■■□□□ 1.47
HDAC6-231ENST00000488905 LAMB2P55268 1798 aa24.25■■□□□ 1.47
HDAC6-231ENST00000488905 IARSP41252 1262 aaKnown RBP24.23■■□□□ 1.47
HDAC6-231ENST00000488905 RIPK4P57078 832 aa24.23■■□□□ 1.47
HDAC6-231ENST00000488905 GIGYF2Q6Y7W6 1299 aaKnown RBP24.23■■□□□ 1.47
HDAC6-231ENST00000488905 RPGRQ92834 1020 aaKnown RBP24.23■■□□□ 1.47
HDAC6-231ENST00000488905 NTSR2O95665 410 aa24.22■■□□□ 1.47
HDAC6-231ENST00000488905 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
HDAC6-231ENST00000488905 ZNF34Q8IZ26 560 aa24.22■■□□□ 1.47
HDAC6-231ENST00000488905 PSMD1Q99460 953 aa24.22■■□□□ 1.47
HDAC6-231ENST00000488905 TAF1DQ9H5J8 278 aaPredicted RBP24.22■■□□□ 1.47
HDAC6-231ENST00000488905 COL4A5P29400 1685 aa24.21■■□□□ 1.47
HDAC6-231ENST00000488905 HOXA10P31260 410 aaPredicted RBP24.21■■□□□ 1.47
HDAC6-231ENST00000488905 LMOD3Q0VAK6 560 aa24.21■■□□□ 1.47
HDAC6-231ENST00000488905 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms